RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 AGPSO00116 658 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 SOCS6O14544 535 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 ZBTB14O43829 449 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 SYF2O95926 243 aaKnown RBP17.18■□□□□ 0.34
HMGN1-219ENST00000491183 IGHEP01854 428 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 SKIV2L2P42285 1042 aaKnown RBP17.18■□□□□ 0.34
HMGN1-219ENST00000491183 UBAP2LQ14157 1087 aaKnown RBP17.18■□□□□ 0.34
HMGN1-219ENST00000491183 MYBPC3Q14896 1274 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 NAA25Q14CX7 972 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 ICE2Q659A1 982 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 SLC6A19Q695T7 634 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 HPS6Q86YV9 775 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 CPT1CQ8TCG5 803 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 NACC2Q96BF6 587 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 C10orf90Q96M02 699 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 PWWP2AQ96N64 755 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 OR2A5Q96R48 311 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 NDNQ99608 321 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 SOX17Q9H6I2 414 aaPredicted RBP17.18■□□□□ 0.34
HMGN1-219ENST00000491183 ZNF304Q9HCX3 659 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 ATP13A2Q9NQ11 1180 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 C5AR2Q9P296 337 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 HS3ST3B1Q9Y662 390 aa17.18■□□□□ 0.34
HMGN1-219ENST00000491183 SMAPO00193 183 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 VPS26AO75436 327 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 IMPA1P29218 277 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 PRR30Q53SZ7 412 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-219ENST00000491183 SPANXN3Q5MJ09 141 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 VWA5B1Q5TIE3 1220 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 KIRREL2Q6UWL6 708 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 UBE2R2Q712K3 238 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-219ENST00000491183 PCGF5Q86SE9 256 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 ATCAYQ86WG3 371 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 CREG2Q8IUH2 290 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 EEF1AKMT1Q8WVE0 214 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 COL26A1Q96A83 441 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 DOCK10Q96BY6 2186 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 MESP1Q9BRJ9 268 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 ABCF3Q9NUQ8 709 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 CDC23Q9UJX2 597 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 RUVBL1Q9Y265 456 aaKnown RBP17.17■□□□□ 0.34
HMGN1-219ENST00000491183 SHANK1Q9Y566 2161 aa17.17■□□□□ 0.34
HMGN1-219ENST00000491183 FLNCQ14315 2725 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 ZNF839A8K0R7 811 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 EIF3FO00303 357 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-219ENST00000491183 ALOX12BO75342 701 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 TTC4O95801 387 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 AHSGP02765 367 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 EMP3P54852 163 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 RELAQ04206 551 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 INPP5JQ15735 1006 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-219ENST00000491183 MUM1Q2TAK8 710 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 HKDC1Q2TB90 917 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 BBS9Q3SYG4 887 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 PLEKHN1Q494U1 663 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-219ENST00000491183 RBM20Q5T481 1227 aaKnown RBP17.16■□□□□ 0.34
HMGN1-219ENST00000491183 PRMT9Q6P2P2 845 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 KLHL7Q8IXQ5 586 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 ARHGEF39Q8N4T4 335 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 STT3BQ8TCJ2 826 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 PNPLA2Q96AD5 504 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 CAPZA3Q96KX2 299 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 ZBTB20Q9HC78 741 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-219ENST00000491183 CUEDC1Q9NWM3 386 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-219ENST00000491183 FBXL4Q9UKA2 621 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 NXT1Q9UKK6 140 aaKnown RBP17.16■□□□□ 0.34
HMGN1-219ENST00000491183 ADAMTS6Q9UKP5 1117 aa17.16■□□□□ 0.34
HMGN1-219ENST00000491183 CCNDBP1O95273 360 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 UQCRFS1P47985 274 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 CARSP49589 748 aaKnown RBP17.15■□□□□ 0.34
HMGN1-219ENST00000491183 CDKN2DP55273 166 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 ABATP80404 500 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 AIMP2Q13155 320 aaKnown RBP17.15■□□□□ 0.34
HMGN1-219ENST00000491183 VWA2Q5GFL6 755 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 HP1BP3Q5SSJ5 553 aaPredicted RBP17.15■□□□□ 0.34
HMGN1-219ENST00000491183 TEDDM1Q5T9Z0 273 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 PAQR3Q6TCH7 311 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 IGFL3Q6UXB1 125 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 LAPTM4BQ86VI4 370 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 PLD3Q8IV08 490 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 CNTN4Q8IWV2 1026 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 CSNK1A1LQ8N752 337 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 EFCAB3Q8N7B9 438 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 GALNT11Q8NCW6 608 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 CERS2Q96G23 380 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 CABS1Q96KC9 395 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 WDR83Q9BRX9 315 aaKnown RBP17.15■□□□□ 0.34
HMGN1-219ENST00000491183 NAT9Q9BTE0 207 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 SLAMF7Q9NQ25 335 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 SEMA3GQ9NS98 782 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 SLC17A6Q9P2U8 582 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 TRMT6Q9UJA5 497 aaKnown RBP17.15■□□□□ 0.34
HMGN1-219ENST00000491183 PDE10AQ9Y233 779 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 DOPEY2Q9Y3R5 2298 aa17.15■□□□□ 0.34
HMGN1-219ENST00000491183 IGLV3-12A0A075B6K2 115 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 H7BY64 318 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 VPS4BO75351 444 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 ZGLP1P0C6A0 271 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 EZRP15311 586 aaKnown RBP17.14■□□□□ 0.33
HMGN1-219ENST00000491183 GNLYP22749 145 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms