RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 NCCRP1Q6ZVX7 275 aaPredicted RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 ACAD11Q709F0 780 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 Q71RC1 249 aaPredicted RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 NT5DC3Q86UY8 548 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 MCATQ8IVS2 390 aaKnown RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 CPSF7Q8N684 471 aaKnown RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 KCT2Q8NC54 265 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 MDS2Q8NDY4 140 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 WFDC11Q8NEX6 87 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 HEXDCQ8WVB3 486 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 HSPH1Q92598 858 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 MIEF2Q96C03 454 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 ZNF653Q96CK0 615 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 SYT11Q9BT88 431 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 POLDIP3Q9BY77 421 aaKnown RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 TMPRSS13Q9BYE2 586 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 CEP41Q9BYV8 373 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 TRIM7Q9C029 511 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 LIME1Q9H400 295 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 DEF6Q9H4E7 631 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 MRPL47Q9HD33 250 aaKnown RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 BPIFA1Q9NP55 256 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 LUC7LQ9NQ29 371 aaKnown RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 RASSF1Q9NS23 344 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 IRAK4Q9NWZ3 460 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 ZNF282Q9UDV7 671 aaPredicted RBP6.95□□□□□ -1.3
RBM39-218ENST00000449489 POLG2Q9UHN1 485 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 C3orf18Q9UK00 162 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 NPIPA1Q9UND3 350 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 ICKQ9UPZ9 632 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 RNF6Q9Y252 685 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 L3MBTL1Q9Y468 752 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 SPO11Q9Y5K1 396 aa6.95□□□□□ -1.3
RBM39-218ENST00000449489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.94□□□□□ -1.32e-17■■□□□ 11.8
RBM39-218ENST00000449489 SVEP1Q4LDE5 3571 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 LOC285095A0A1B0GVY8 99 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 FAM227AF5H4B4 570 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 PES1O00541 588 aaKnown RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 EPHB6O15197 1021 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 SRPX2O60687 465 aaPredicted RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 SLC4A1P02730 911 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 POLBP06746 335 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 CHRM5P08912 532 aaPredicted RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 EEF1DP29692 281 aaKnown RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 AKT1P31749 480 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ARSEP51690 589 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 PPIDQ08752 370 aaKnown RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 AP1B1Q10567 949 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 PIGHQ14442 188 aaPredicted RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 DEFB113Q30KQ7 82 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ZC3H12BQ5HYM0 836 aaKnown RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 SHEQ5VZ18 495 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ZNF449Q6P9G9 518 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 KDELC1Q6UW63 502 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 FAM151BQ6UXP7 276 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 SHISA6Q6ZSJ9 500 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 DAAM2Q86T65 1068 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 TRIM73Q86UV7 250 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 LILRA3Q8N6C8 439 aaPredicted RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 HORMAD2Q8N7B1 307 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 NIPA2Q8N8Q9 360 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 TMEM178AQ8NBL3 297 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 FAM98AQ8NCA5 519 aaKnown RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 LRRN4CLQ8ND94 238 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ACRBPQ8NEB7 543 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 FAM57AQ8TBR7 257 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ZNF398Q8TD17 642 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 UBASH3BQ8TF42 649 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 RND1Q92730 232 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 TFGQ92734 400 aaPredicted RBP6.94□□□□□ -1.3
RBM39-218ENST00000449489 C8orf44Q96CB5 159 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 FAF2Q96CS3 445 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 IMMP1LQ96LU5 166 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 OLFM1Q99784 485 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 C19orf43Q9BQ61 176 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 MESP1Q9BRJ9 268 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ZNF670Q9BS34 389 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 TUBB6Q9BUF5 446 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 SARGQ9BW04 601 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ZNF700Q9H0M5 742 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 THAP2Q9H0W7 228 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ZNF304Q9HCX3 659 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 ADAM30Q9UKF2 790 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 PLEKHA6Q9Y2H5 1048 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 TGP01266 2768 aa6.94□□□□□ -1.3
RBM39-218ENST00000449489 NKX2-6A6NCS4 301 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 KDM1AO60341 852 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 FKBP9O95302 570 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 F10P00742 488 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 UQCRHP07919 91 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 CYC1P08574 325 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 MYBL1P10243 752 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 ITGAMP11215 1152 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 RALBP11234 206 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 TCF4P15884 667 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 FERP16591 822 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 OR1D4P47884 311 aa6.93□□□□□ -1.3
RBM39-218ENST00000449489 EMP2P54851 167 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms