RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 BDKRB1P46663 353 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 EMP3P54852 163 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 ACVR1Q04771 509 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 HIBCHQ6NVY1 386 aaPredicted RBP23.18■■□□□ 1.3
PMS1-214ENST00000446877 FBXO42Q6P3S6 717 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 XKRXQ6PP77 449 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 OTOAQ7RTW8 1153 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 LDB1Q86U70 411 aaPredicted RBP23.18■■□□□ 1.3
PMS1-214ENST00000446877 UBL4BQ8N7F7 174 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 MVB12AQ96EY5 273 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 ZNF778Q96MU6 729 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 DPH7Q9BTV6 452 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 RNF32Q9H0A6 362 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 STMN3Q9NZ72 180 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 TEKT2Q9UIF3 430 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 ITGB1BP2Q9UKP3 347 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 NFS1Q9Y697 457 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 CELSR1Q9NYQ6 3014 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 OR5H15A6NDH6 313 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 H0YGG7 62 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 NRP2O60462 931 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 ARF3P61204 181 aaPredicted RBP23.17■■□□□ 1.3
PMS1-214ENST00000446877 LONRF1Q17RB8 773 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 PRTGQ2VWP7 1150 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 CCSMST1Q4G0I0 132 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 CSNK1A1LQ8N752 337 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 SLC35B2Q8TB61 432 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 MMABQ96EY8 250 aaPredicted RBP23.17■■□□□ 1.3
PMS1-214ENST00000446877 ACAT2Q9BWD1 397 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 ETNK1Q9HBU6 452 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 MKKSQ9NPJ1 570 aaPredicted RBP23.17■■□□□ 1.3
PMS1-214ENST00000446877 GNPTGQ9UJJ9 305 aa23.17■■□□□ 1.3
PMS1-214ENST00000446877 R3HDM2Q9Y2K5 976 aaKnown RBP23.17■■□□□ 1.3
PMS1-214ENST00000446877 EPN1Q9Y6I3 576 aaPredicted RBP23.17■■□□□ 1.3
PMS1-214ENST00000446877 OR2A25A4D2G3 310 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 RCCD1A6NED2 376 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 FFAR3O14843 346 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 CD3EAPO15446 510 aaKnown RBP23.16■■□□□ 1.3
PMS1-214ENST00000446877 GPR42O15529 346 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 PHF2O75151 1096 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 SUN1O94901 812 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 CELA2AP08217 269 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 ESRRAP11474 423 aaPredicted RBP23.16■■□□□ 1.3
PMS1-214ENST00000446877 STIP1P31948 543 aaKnown RBP23.16■■□□□ 1.3
PMS1-214ENST00000446877 RNF214Q8ND24 703 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 PPHLN1Q8NEY8 458 aaKnown RBP23.16■■□□□ 1.3
PMS1-214ENST00000446877 PEX13Q92968 403 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 ZNF700Q9H0M5 742 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 SPATA7Q9P0W8 599 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 AMFRQ9UKV5 643 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 RUVBL2Q9Y230 463 aaKnown RBP23.16■■□□□ 1.3
PMS1-214ENST00000446877 TCAF1Q9Y4C2 921 aa23.16■■□□□ 1.3
PMS1-214ENST00000446877 DCHS2Q6V1P9 2916 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 NDUFS3O75489 264 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 ITGAMP11215 1152 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 FDFT1P37268 417 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 GRIA1P42261 906 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 SMSP52788 366 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 SRSF11Q05519 484 aaKnown RBP23.15■■□□□ 1.3
PMS1-214ENST00000446877 ZNF33BQ06732 778 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 PEX26Q7Z412 305 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 LRRC6Q86X45 466 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 TGIF2Q9GZN2 237 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 IGSF5Q9NSI5 407 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 UTP6Q9NYH9 597 aaKnown RBP23.15■■□□□ 1.3
PMS1-214ENST00000446877 CCDC168Q8NDH2 2452 aa23.15■■□□□ 1.3
PMS1-214ENST00000446877 LOC102723996A0A087X1L8 192 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 A0A1W2PPV9 198 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 KRT87PA6NCN2 255 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 BTNL10A8MVZ5 291 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 SLC19A2O60779 497 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 RPA3P35244 121 aaPredicted RBP23.14■■□□□ 1.29
PMS1-214ENST00000446877 SLC26A3P40879 764 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 KLF1Q13351 362 aaPredicted RBP23.14■■□□□ 1.29
PMS1-214ENST00000446877 GARNL3Q5VVW2 1013 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 LRRC57Q8N9N7 239 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 RERGQ96A58 199 aaPredicted RBP23.14■■□□□ 1.29
PMS1-214ENST00000446877 TUBB6Q9BUF5 446 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 P2RY12Q9H244 342 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 MRPS30Q9NP92 439 aaKnown RBP23.14■■□□□ 1.29
PMS1-214ENST00000446877 MARCH4Q9P2E8 410 aaPredicted RBP23.14■■□□□ 1.29
PMS1-214ENST00000446877 MKL2Q9ULH7 1088 aa23.14■■□□□ 1.29
PMS1-214ENST00000446877 RUVBL1Q9Y265 456 aaKnown RBP23.14■■□□□ 1.29
PMS1-214ENST00000446877 PKDREJQ9NTG1 2253 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 GRID2IPA4D2P6 1211 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 A8MUI8 341 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 IFNB1P01574 187 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 YBX1P67809 324 aaKnown RBP23.13■■□□□ 1.29
PMS1-214ENST00000446877 FASTKQ14296 549 aaKnown RBP23.13■■□□□ 1.29
PMS1-214ENST00000446877 PCOLCEQ15113 449 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 LRRC8BQ6P9F7 803 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 NEK10Q6ZWH5 1172 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 METTL21AQ8WXB1 218 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 SMPDL3AQ92484 453 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 PLCD4Q9BRC7 762 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 TSPY26PQ9H489 355 aa23.13■■□□□ 1.29
PMS1-214ENST00000446877 MIF4GDA9UHW6 222 aaKnown RBP23.12■■□□□ 1.29
PMS1-214ENST00000446877 TXNDC9O14530 226 aa23.12■■□□□ 1.29
PMS1-214ENST00000446877 MLYCDO95822 493 aa23.12■■□□□ 1.29
PMS1-214ENST00000446877 C8orf89P0DMQ9 161 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms