RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 PRR35P0CG20 571 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 TNNT1P13805 278 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 IL10P22301 178 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 PEBP1P30086 187 aaKnown RBP7.9□□□□□ -1.14
CDH13-203ENST00000431540 SSTR2P30874 369 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 CCR7P32248 378 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 SLC26A3P40879 764 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 CA7P43166 264 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 SMSP52788 366 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 ARG2P78540 354 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 TMPRSS15P98073 1019 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 KLC1Q07866 573 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 GRB7Q14451 532 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 HIF1AQ16665 826 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 LONRF1Q17RB8 773 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 FASTKD1Q53R41 847 aaKnown RBP7.9□□□□□ -1.14
CDH13-203ENST00000431540 WASHC2DQ5SRD0 308 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 H3F3CQ6NXT2 135 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 TMEM205Q6UW68 189 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 COX15Q7KZN9 410 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 MCEMP1Q8IX19 187 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 PARP9Q8IXQ6 854 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 CCDC116Q8IYX3 515 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 SYCE1Q8N0S2 351 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 UBL4BQ8N7F7 174 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 LINC01555Q8NAE3 123 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 OR1N1Q8NGS0 311 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 PSMF1Q92530 271 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 RNF31Q96EP0 1072 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 C14orf79Q96F83 325 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 APOL2Q9BQE5 337 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 TUBB6Q9BUF5 446 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 KLHL25Q9H0H3 589 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 ZNF700Q9H0M5 742 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 KLHL42Q9P2K6 505 aa7.9□□□□□ -1.14
CDH13-203ENST00000431540 PHF3Q92576 2039 aaKnown RBP7.9□□□□□ -1.15
CDH13-203ENST00000431540 OR2A25A4D2G3 310 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 PRSS44E7EML9 344 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 ZG16O60844 167 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 KLHL18O94889 574 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 RASAL1O95294 804 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 MATN4O95460 622 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 ERGP11308 486 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 POU3F2P20265 443 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 CMPK1P30085 196 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 EMP2P54851 167 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 ABATP80404 500 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 MEF2AQ02078 507 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 HSPA14Q0VDF9 509 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 KLF1Q13351 362 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 PRTGQ2VWP7 1150 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 VWA2Q5GFL6 755 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 TSTD2Q5T7W7 516 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 NIPAL1Q6NVV3 410 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 FBXO42Q6P3S6 717 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 SPNS3Q6ZMD2 512 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 Q6ZPB1 254 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 NEK10Q6ZWH5 1172 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 RNF44Q7L0R7 432 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 SRRM1Q8IYB3 904 aaKnown RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 LGI4Q8N135 537 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 HORMAD2Q8N7B1 307 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 GPATCH11Q8N954 259 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 FBXO15Q8NCQ5 510 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 OR2L3Q8NG85 312 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 OR13J1Q8NGT2 312 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 OR2A1Q8NGT9 310 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 SLC35B2Q8TB61 432 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 ITLN2Q8WWU7 325 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 HDAC10Q969S8 669 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 EBNA1BP2Q99848 306 aaKnown RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 ZFYVE21Q9BQ24 234 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 CRB3Q9BUF7 120 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 C3orf18Q9UK00 162 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 DRG1Q9Y295 367 aaKnown RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 ZNF835Q9Y2P0 537 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 HYOU1Q9Y4L1 999 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 EPN1Q9Y6I3 576 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 PRSS21Q9Y6M0 314 aa7.89□□□□□ -1.15
CDH13-203ENST00000431540 SETD2Q9BYW2 2564 aaPredicted RBP7.89□□□□□ -1.15
CDH13-203ENST00000431540 HIVEP1P15822 2718 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 HCFC1P51610 2035 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 SCN3AQ9NY46 2000 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 KCNE1BA0A087WTH5 132 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 IGHV1-45A0A0A0MS14 117 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 CCDC162PA2VCL2 907 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 H0YIG0 161 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 CCNDBP1O95273 360 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 C1orf105O95561 183 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 METTL18O95568 372 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 COX6A1P12074 109 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 NPY2RP49146 381 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 PRAMEP78395 509 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 CDK16Q00536 496 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 PRDX1Q06830 199 aaKnown RBP7.88□□□□□ -1.15
CDH13-203ENST00000431540 Q0VFX4 171 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 POU6F1Q14863 301 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 NDUFA9Q16795 377 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 DEFB110Q30KQ9 67 aa7.88□□□□□ -1.15
CDH13-203ENST00000431540 ANKRD20A4Q4UJ75 823 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms