RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 WBP4O75554 376 aaKnown RBP16.6■□□□□ 0.25
PTPRA-205ENST00000399903 IGHA2P01877 340 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 C1QCP02747 245 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 PGRP06401 933 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 GDF5P43026 501 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 UGT2B15P54855 530 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 SCAPQ12770 1279 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 CLLU1OSQ5K130 101 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 PGBD5Q8N414 524 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 AADATQ8N5Z0 425 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 DPP10Q8N608 796 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 OR4L1Q8NH43 312 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 EEF1AKMT1Q8WVE0 214 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 SLA2Q9H6Q3 261 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 NARFLQ9H6Q4 476 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 ABCB9Q9NP78 766 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 PDCD11Q14690 1871 aaKnown RBP16.6■□□□□ 0.25
PTPRA-205ENST00000399903 ANKRD28O15084 1053 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 SERPINF2P08697 491 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 JUNDP17535 347 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 ACVR2AP27037 513 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 TIAL1Q01085 375 aaKnown RBP eCLIP16.6■□□□□ 0.25
PTPRA-205ENST00000399903 XKR7Q5GH72 579 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 OR4F6Q8NGB9 312 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 CD99L2Q8TCZ2 262 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 CHAC2Q8WUX2 184 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 ZNF566Q969W8 418 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 TSSK3Q96PN8 268 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 TSGA13Q96PP4 275 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 CATSPERBQ9H7T0 1116 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 REEP1Q9H902 201 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 MRM3Q9HC36 420 aaKnown RBP16.6■□□□□ 0.25
PTPRA-205ENST00000399903 AASDHPPTQ9NRN7 309 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 ABCB8Q9NUT2 735 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 C1orf109Q9NX04 203 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 NPRL3Q12980 569 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 FADDQ13158 208 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 NFE2Q16621 373 aaPredicted RBP16.59■□□□□ 0.25
PTPRA-205ENST00000399903 GPAT3Q53EU6 434 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 SHQ1Q6PI26 577 aaKnown RBP16.59■□□□□ 0.25
PTPRA-205ENST00000399903 SCD5Q86SK9 330 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 ENTHD1Q8IYW4 607 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 FAM109AQ8N4B1 249 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 KIAA1958Q8N8K9 716 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 OR8J3Q8NGG0 315 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 RMDN1Q96DB5 314 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 TMCO6Q96DC7 493 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 OR2A14Q96R47 310 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 EGFL8Q99944 293 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 INPP5KQ9BT40 448 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 ANKHQ9HCJ1 492 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 BPIFA1Q9NP55 256 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 UPK3BL1B0FP48 263 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 UPK3BL2E5RIL1 263 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 OR1I1O60431 355 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 SLITRK5O94991 958 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 ITGAMP11215 1152 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 BMP1P13497 986 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 RPL9P32969 192 aaKnown RBP16.59■□□□□ 0.25
PTPRA-205ENST00000399903 POU6F2P78424 691 aaPredicted RBP16.59■□□□□ 0.25
PTPRA-205ENST00000399903 EFEMP1Q12805 493 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 PDE12Q6L8Q7 609 aaKnown RBP16.59■□□□□ 0.25
PTPRA-205ENST00000399903 FAM171BQ6P995 826 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 DOK6Q6PKX4 331 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 FAM131AQ6UXB0 335 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 TMPRSS11AQ6ZMR5 421 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 ST13P5Q8NFI4 369 aaPredicted RBP16.59■□□□□ 0.25
PTPRA-205ENST00000399903 DEDD2Q8WXF8 326 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 PSMG2Q969U7 264 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 COQ8BQ96D53 544 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 SEMA3CQ99985 751 aa16.59■□□□□ 0.25
PTPRA-205ENST00000399903 FBXO9Q9UK97 447 aaPredicted RBP16.59■□□□□ 0.25
PTPRA-205ENST00000399903 MOXD2PA6NHM9 499 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 ERN1O75460 977 aaKnown RBP16.58■□□□□ 0.25
PTPRA-205ENST00000399903 PRR35P0CG20 571 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 HAPLN1P10915 354 aaPredicted RBP16.58■□□□□ 0.25
PTPRA-205ENST00000399903 CKBP12277 381 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 ATF4P18848 351 aaPredicted RBP16.58■□□□□ 0.25
PTPRA-205ENST00000399903 DDOSTP39656 456 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 ACLYP53396 1101 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 CAMK2GQ13555 558 aaPredicted RBP16.58■□□□□ 0.25
PTPRA-205ENST00000399903 GPR50Q13585 617 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 SLC14A2Q15849 920 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 KDELC1Q6UW63 502 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 GLCCI1Q86VQ1 547 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 THEM5Q8N1Q8 247 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 LINC01599Q8WXQ3 324 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 PMEPA1Q969W9 287 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 EGLN2Q96KS0 407 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 SDHCQ99643 169 aaPredicted RBP16.58■□□□□ 0.25
PTPRA-205ENST00000399903 AARSD1Q9BTE6 412 aaKnown RBP16.58■□□□□ 0.25
PTPRA-205ENST00000399903 SLC25A51Q9H1U9 297 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 SIRT5Q9NXA8 310 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 MALT1Q9UDY8 824 aa16.58■□□□□ 0.25
PTPRA-205ENST00000399903 TRMT6Q9UJA5 497 aaKnown RBP16.58■□□□□ 0.25
PTPRA-205ENST00000399903 A8MUA0 341 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 CAPN5O15484 640 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms