RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ARHGAP19Q14CB8 494 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 EFTUD2Q15029 972 aaKnown RBP eCLIP8.88□□□□□ -0.992e-22■■■■■ 48.1
HMGN1-202ENST00000380747 DEFB110Q30KQ9 67 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 UBAP2Q5T6F2 1119 aaKnown RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 GRTP1Q5TC63 336 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 THEMIS2Q5TEJ8 643 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 PRAMEF17Q5VTA0 474 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 KIAA1614Q5VZ46 1190 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 TMEM207Q6UWW9 146 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 LURAP1LQ8IV03 231 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 CEP97Q8IW35 865 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 NKAPQ8N5F7 415 aaKnown RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 ESX1Q8N693 406 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 OR1L3Q8NH93 324 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 HMGCLL1Q8TB92 370 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF480Q8WV37 535 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 DLG3Q92796 817 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 KIAA1143Q96AT1 154 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 ALKBH8Q96BT7 664 aaKnown RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 CLIP3Q96DZ5 547 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 HIST1H2AHQ96KK5 128 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 RBBP8Q99708 897 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 HIST1H2AJQ99878 128 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 H2AFJQ9BTM1 129 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 SLC12A9Q9BXP2 914 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 TRIM54Q9BYV2 358 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 SPRY4Q9C004 299 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 SLC7A5P2Q9GIP4 190 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 TWSG1Q9GZX9 223 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 CDC42EP4Q9H3Q1 356 aaKnown RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 CAB39LQ9H9S4 337 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 GPN2Q9H9Y4 310 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 PARVBQ9HBI1 364 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 SYTL2Q9HCH5 934 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 SERTAD3Q9UJW9 196 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 NFU1Q9UMS0 254 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 PDE10AQ9Y233 779 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 MTO1Q9Y2Z2 717 aaKnown RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 DOPEY2Q9Y3R5 2298 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 LOC101059948A0A1B0GTJ6 334 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 NPEPPSL1A6NEC2 478 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 E7ENX8 843 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 E7EQ34 232 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 PHGDHO43175 533 aaKnown RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 CPNE3O75131 537 aaKnown RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 CCNDBP1O95273 360 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 FKBP9O95302 570 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 ACSL3O95573 720 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 C1QAP02745 245 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 MT-ND3P03897 115 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 LIFP15018 202 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF37AP17032 561 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 IMPA1P29218 277 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 ECHS1P30084 290 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 SPRP35270 261 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 GRIA3P42263 894 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 POU4F1Q01851 419 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 TAP2Q03519 686 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 ABHD18Q0P651 414 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 SP140Q13342 867 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 NAB1Q13506 487 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 MAP7Q14244 749 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 NAA30Q147X3 362 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 SLMAPQ14BN4 828 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 UAP1Q16222 522 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 PHKG1Q16816 387 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 TEX35Q5T0J7 233 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 FCRL6Q6DN72 434 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 FIGLAQ6QHK4 219 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 MBOAT1Q6ZNC8 495 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 GPR135Q8IZ08 494 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 DNAJC22Q8N4W6 341 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 OR2L3Q8NG85 312 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 OR2A1Q8NGT9 310 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 CCDC138Q96M89 665 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 FCRL4Q96PJ5 515 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 CYTH2Q99418 400 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 GPR22Q99680 433 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 MCMBPQ9BTE3 642 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 DPH7Q9BTV6 452 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 CHRNA10Q9GZZ6 450 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 SPRTNQ9H040 489 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 L2HGDHQ9H9P8 463 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 POPDC3Q9HBV1 291 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 GPAMQ9HCL2 828 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 MRPS30Q9NP92 439 aaKnown RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 STARD5Q9NSY2 213 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 ARL15Q9NXU5 204 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 UTP6Q9NYH9 597 aaKnown RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 EURLQ9NYK6 297 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 STOX2Q9P2F5 926 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-202ENST00000380747 TAC3Q9UHF0 121 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 PADI1Q9ULC6 663 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 PLCL2Q9UPR0 1127 aa8.87□□□□□ -0.99
HMGN1-202ENST00000380747 TARM1B6A8C7 271 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 PYCARD-AS1I3L0S3 204 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 CDC7O00311 574 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 EFSO43281 561 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms