RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 BMP1P13497 986 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 GPR1P46091 355 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 SUSD6Q92537 303 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 MTG2Q9H4K7 406 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 UNCXA6NJT0 531 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 GRIN3BO60391 1043 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ALPPP05187 535 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 KLRK1P26718 216 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 GALNT2Q10471 571 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 GPR153Q6NV75 609 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF613Q6PF04 617 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 SNX27Q96L92 541 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 DOHHQ9BU89 302 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ABT1Q9ULW3 272 aaKnown RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ERCC1P07992 297 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 MAGEA6P43360 314 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 STC1P52823 247 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 PRKCDQ05655 676 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 DPY19L3Q6ZPD9 716 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CILP2Q8IUL8 1156 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 OR14K1Q8NGZ2 314 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CDADC1Q9BWV3 514 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 KCNIP3Q9Y2W7 256 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 DSTNP60981 165 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 GRM2Q14416 872 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 OR52E8Q6IFG1 317 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 TMEM246Q9BRR3 403 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 MTFR1LQ9H019 292 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 MAT2BQ9NZL9 334 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 H0Y858 1186 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 FLRT2O43155 660 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 NUDT14O95848 222 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 FGF3P11487 239 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ADH6P28332 368 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 GRK6P43250 576 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 RPP38P78345 283 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 DEFA5Q01523 94 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 GPRC6AQ5T6X5 926 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 FAM171BQ6P995 826 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ULK3Q6PHR2 472 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 LINGO2Q7L985 606 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 OR10T2Q8NGX3 314 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 PBDC1Q9BVG4 233 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CLDN24A6NM45 220 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CRYZL1O95825 349 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 GOT2P00505 430 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CYP2B6P20813 491 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 REEP3Q6NUK4 255 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 BRAT1Q6PJG6 821 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 RALGPS2Q86X27 583 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 PHC2Q8IXK0 858 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 SLC43A3Q8NBI5 491 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 MAELQ96JY0 434 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 HSPA12BQ96MM6 686 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 TRPV4Q9HBA0 871 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 MKKSQ9NPJ1 570 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 RAI2Q9Y5P3 530 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 TLX3O43711 291 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 FGF4P08620 206 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CXorf57Q6NSI4 855 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 EPYCQ99645 322 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 COL2A1P02458 1487 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 BORCS7-ASMTA0A0B4J1R7 106 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 FAM155BO75949 473 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 POP4O95707 220 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 GPX6P59796 221 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 DSC3Q14574 896 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ANKDD1AQ495B1 522 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 LIPJQ5W064 366 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 L3HYPDHQ96EM0 354 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 SIGLEC10Q96LC7 697 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CASTOR2A6NHX0 329 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 RENP00797 406 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 PRH1P02810 166 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 RHCEP18577 417 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 BMP8BP34820 402 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CHIT1Q13231 466 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 COL28A1Q2UY09 1125 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 BMP8AQ7Z5Y6 402 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 VWA5B2Q8N398 1253 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 C1orf127Q8N9H9 656 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 SLC35G5Q96KT7 338 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 MYRFLQ96LU7 910 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ANKMY1Q9P2S6 941 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF69Q9UC07 566 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 FZD4Q9ULV1 537 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ASF1AQ9Y294 204 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CHMP24386 653 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 DAOAP59103 153 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 RCAN2Q14206 197 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ADGRG2Q8IZP9 1017 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 Q8N402 240 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 MTMR14Q8NCE2 650 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 VANGL1Q8TAA9 524 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 OR4K3Q96R72 315 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 MRPL45Q9BRJ2 306 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 TBC1D17Q9HA65 648 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms