RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ELP6Q0PNE2 266 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 NFATC2Q13469 925 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 HSP90B2PQ58FF3 399 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 KHDC1LQ5JSQ8 128 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CTSL3PQ5NE16 218 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 HENMT1Q5T8I9 393 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 SEL1L3Q68CR1 1132 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 MRNIPQ6NTE8 343 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TMEM207Q6UWW9 146 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 KIAA1324Q6UXG2 1013 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 KDM7AQ6ZMT4 941 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SYT13Q7L8C5 426 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SNX20Q7Z614 316 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CMC1Q7Z7K0 106 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 GALNT7Q86SF2 657 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SDCCAG8Q86SQ7 713 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 FAM124AQ86V42 546 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CEP97Q8IW35 865 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 LMNTD2Q8IXW0 634 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 NRSN1Q8IZ57 195 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CARFQ8N187 725 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 BANPQ8N9N5 519 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PLA2G15Q8NCC3 412 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 MDM1Q8TC05 714 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CALML6Q8TD86 181 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DENND1AQ8TEH3 1009 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 GANCQ8TET4 914 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 HMGB4Q8WW32 186 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 KLK6Q92876 244 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DTD2Q96FN9 168 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 BIRC8Q96P09 236 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PLEKHG4BQ96PX9 1271 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 GPR22Q99680 433 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 OLFM1Q99784 485 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 OSBPL6Q9BZF3 934 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PITHD1Q9GZP4 211 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 P2RY12Q9H244 342 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ASB8Q9H765 288 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 NSMCE4AQ9NXX6 385 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PKD2L2Q9NZM6 624 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 KIF17Q9P2E2 1029 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 NFKBIL1Q9UBC1 381 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 APPL1Q9UKG1 709 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 MRPS17Q9Y2R5 130 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 MED16Q9Y2X0 877 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SLC30A1Q9Y6M5 507 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TRPM6Q9BX84 2022 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PLXNA2O75051 1894 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 IQCF5A8MTL0 148 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PSMD11O00231 422 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 RAD51BO15315 384 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 NDUFS3O75489 264 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 WISP3O95389 354 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 TOP3BO95985 862 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 DNTTP04053 509 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 C2P06681 752 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DCNP07585 359 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 ITGALP20701 1170 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SAT1P21673 171 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 NFKBIAP25963 317 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ACRV1P26436 265 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 HPDP32754 393 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 ACSL1P33121 698 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PTGER3P43115 390 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CLCN5P51795 746 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DGKEP52429 567 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PNLIPRP1P54315 467 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ADPRHP54922 357 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DCDC1P59894 354 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DCAF7P61962 342 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PPP2CBP62714 309 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PPP2CAP67775 309 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ZBTB16Q05516 673 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DBPQ10586 325 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 DLG1Q12959 904 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 MTAPQ13126 283 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DNAJC3Q13217 504 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 GPS2Q13227 327 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PTK2BQ14289 1009 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 USP10Q14694 798 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 ZKSCAN8Q15776 578 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 WSCD2Q2TBF2 565 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CR1LQ2VPA4 569 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 GPR33Q49SQ1 333 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PHF19Q5T6S3 580 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 GPRC6AQ5T6X5 926 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 LGSNQ5TDP6 509 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 THEMIS2Q5TEJ8 643 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 HECTD2Q5U5R9 776 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 FAM205BPQ63HN1 556 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CDHR3Q6ZTQ4 885 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 USP30Q70CQ3 517 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ZNF771Q7L3S4 317 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 PIM3Q86V86 326 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 KRT222Q8N1A0 295 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TRAM1L1Q8N609 369 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CLDN19Q8N6F1 224 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 FRMD1Q8N878 549 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 LKAAEAR1Q8TD35 194 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DTX3LQ8TDB6 740 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms