RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SGPP1Q9BX95 441 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SLC29A3Q9BZD2 475 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 FAM49AQ9H0Q0 323 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 NTMQ9P121 344 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MAGEL2Q9UJ55 1249 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF318Q5VUA4 2279 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 A0A1W2PPV9 198 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 C4orf51C9J302 202 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CACNB4O00305 520 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 PI15O43692 258 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CIB2O75838 187 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 THY1P04216 161 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TFPTP0C1Z6 253 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 ENO3P13929 434 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF12P17014 697 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 HPCAL1P37235 193 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 YAP1P46937 504 aaKnown RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 ALDH7A1P49419 539 aaKnown RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 BCAP31P51572 246 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TBX4P57082 545 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 VEZF1Q14119 521 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CRB2Q5IJ48 1285 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 C12orf73Q69YU5 71 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 FAM129CQ86XR2 697 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 LYSMD2Q8IV50 215 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF547Q8IVP9 402 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 SVOPLQ8N434 492 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CCNYQ8ND76 341 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 NDNFQ8TB73 568 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 MYLIPQ8WY64 445 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 DNASE1L2Q92874 299 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 C9orf16Q9BUW7 83 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 SARGQ9BW04 601 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 SMURF2Q9HAU4 748 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CYP4F12Q9HCS2 524 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 ANKRD10Q9NXR5 420 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 DNAJB9Q9UBS3 223 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 FKBPLQ9UIM3 349 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 FADS3Q9Y5Q0 445 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 IKBKGQ9Y6K9 419 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 SLC12A8A0AV02 714 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 FADS2P1A8MWK0 482 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 MANBAO00462 879 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 POMCP01189 267 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 KCNAB2Q13303 367 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 MAPRE2Q15555 327 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 PFKFB4Q16877 469 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 SLC44A4Q53GD3 710 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 BHLHB9Q6PI77 547 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 GDPD4Q6W3E5 623 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 GAREM2Q75VX8 874 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CENPSQ8N2Z9 138 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 OR7D4Q8NG98 312 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TSPAN17Q96FV3 270 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TXNDC15Q96J42 360 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 B3GALT6Q96L58 329 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 LINC00615Q96LM1 132 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 PPP1R36Q96LQ0 422 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 COL25A1Q9BXS0 654 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 FBXO44Q9H4M3 255 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TMEM38AQ9H6F2 299 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 PLGRKTQ9HBL7 147 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 NT5MQ9NPB1 228 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 MRPL40Q9NQ50 206 aaKnown RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 NUDT5Q9UKK9 219 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CRYL1Q9Y2S2 319 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 A0A087WXM4 84 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 KRBA1A5PL33 1030 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TMEM202A6NGA9 273 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 SLITRK5O94991 958 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 PDYNP01213 254 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CBSLP0DN79 551 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 PKMP14618 531 aaKnown RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 IBSPP21815 317 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CBSP35520 551 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 XCR1P46094 333 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TAF10Q12962 218 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 AGERQ15109 404 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 CRTC1Q6UUV9 634 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 ABRAXAS1Q6UWZ7 409 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 OFCC1Q8IZS5 231 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 TNIP2Q8NFZ5 429 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 OR4K1Q8NGD4 311 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 HOXD1Q9GZZ0 328 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 UBE2ZQ9H832 354 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 SLAMF7Q9NQ25 335 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 OLA1Q9NTK5 396 aaKnown RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 MKLN1Q9UL63 735 aa7.57□□□□□ -1.2
CNOT4-201ENST00000315544 FAM32AQ9Y421 112 aaKnown RBP7.57□□□□□ -1.2
CNOT4-201ENST00000315544 IGKV1-8A0A0C4DH67 115 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 DFFAO00273 331 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 FFAR2O15552 330 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SOCS5O75159 536 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SNX4O95219 450 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 PIPP12273 146 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF8P17098 575 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 UGT1A4P22310 534 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 UGT1A3P35503 534 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms