RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 TDRPQ86YL5 185 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 DCUN1D3Q8IWE4 304 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 SLC5A11Q8WWX8 675 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 GAL3ST1Q99999 423 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 ASPNQ9BXN1 380 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 POLR2J3Q9H1A7 115 aaKnown RBP20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 CA14Q9ULX7 337 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 ADGRD2Q7Z7M1 963 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 SGIP1Q9BQI5 828 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 TMEM248Q9NWD8 314 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 COL14A1Q05707 1796 aaKnown RBP20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 GP1BBP13224 206 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 CEP97Q8IW35 865 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 MARCH7Q9H992 704 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 POLR2CP19387 275 aaPredicted RBP20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 RAB8AP61006 207 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 HMGCS1Q01581 520 aa20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 FIP1L1Q6UN15 594 aaKnown RBP20.21■□□□□ 0.83
SH3RF3-201ENST00000309415 FAM240BA0A1B0GVZ2 78 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 PTGIRP43119 386 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 GBX2P52951 348 aaPredicted RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 NIPAL1Q6NVV3 410 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 ERN2Q76MJ5 926 aaKnown RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 TWNKQ96RR1 684 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 SIX2Q9NPC8 291 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 FLRT1Q9NZU1 646 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 SUSD2Q9UGT4 822 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 PCDHGB1Q9Y5G3 927 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 CYP17A1P05093 508 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 SLC39A3Q9BRY0 314 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 TBX1O43435 398 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 JUNP05412 331 aaKnown RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 CBX3Q13185 183 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 CBR4Q8N4T8 237 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 PHOSPHO1Q8TCT1 267 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 TBX5Q99593 518 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 NKX2-4Q9H2Z4 354 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 FKBP7Q9Y680 259 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 TFECO14948 347 aaPredicted RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 RPL26P61254 145 aaKnown RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 PUDPQ08623 228 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 ZSCAN4Q8NAM6 433 aaPredicted RBP20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 OR52E4Q8NGH9 312 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 CHCHD6Q9BRQ6 235 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 SPHK2Q9NRA0 654 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 GPR34Q9UPC5 381 aa20.2■□□□□ 0.82
SH3RF3-201ENST00000309415 C2orf74A8MZ97 194 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 TEX46H3BTG2 121 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 TNFRSF10BO14763 440 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 ZMYND11Q15326 602 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 IL22RA1Q8N6P7 574 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 ZNF676Q8N7Q3 588 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 TMEM209Q96SK2 561 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 SMOQ99835 787 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 SLC29A3Q9BZD2 475 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 BRD7Q9NPI1 651 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 HMGN1P05114 100 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 PGRP06401 933 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 LINGO3P0C6S8 592 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 SHMT2P34897 504 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 PREPP48147 710 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 CRB2Q5IJ48 1285 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 LRTOMTQ8WZ04 291 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 ACTL8Q9H568 366 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 TRIM64A6NGJ6 449 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 LDB2O43679 373 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 FHP07954 510 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 ABCA11PQ4W5N1 156 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 C6orf52Q5T4I8 152 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 OR9A1PQ8NGU1 263 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 SLC35F5Q8WV83 523 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 HRASLS2Q9NWW9 162 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 CAPN8A6NHC0 703 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 FOXO6A8MYZ6 492 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 ABATP80404 500 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 SEMA3AQ14563 771 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 PRPF38BQ5VTL8 546 aaKnown RBP20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 OR56A1Q8NGH5 318 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 OR6N1Q8NGY5 312 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 SYNGR4O95473 234 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 BCHEP06276 602 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 IL1R2P27930 398 aa20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 CMTR2Q8IYT2 770 aaKnown RBP20.19■□□□□ 0.82
SH3RF3-201ENST00000309415 RAP2AP10114 183 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 ADAM8P78325 824 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 RAB26Q9ULW5 256 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 PGAM2P15259 253 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 ENGP17813 658 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 OR3A3P47888 321 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 OR3A2P47893 321 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 QPCTQ16769 361 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 PLET1Q6UQ28 207 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 LRP10Q7Z4F1 713 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 OR2M4Q96R27 311 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 B4GALT6Q9UBX8 382 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 PRAMEF11O60813 436 aa20.18■□□□□ 0.82
SH3RF3-201ENST00000309415 NANOGNBQ7Z5D8 188 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms