RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 GPR68Q15743 365 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 GFOD2Q3B7J2 385 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 RABL3Q5HYI8 236 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 MS4A13Q5J8X5 152 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ERMP1Q7Z2K6 904 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 OR10Q1Q8NGQ4 319 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 GRHL3Q8TE85 626 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 CRELD1Q96HD1 420 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 CLCC1Q96S66 551 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 NPY6RQ99463 290 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 PCDHGA10Q9Y5H3 936 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 H1F0P07305 194 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ACRP10323 421 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ACTR1BP42025 376 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 NUDT6P53370 316 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ACTR1AP61163 376 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 PRR23BQ6ZRT6 265 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 NUP54Q7Z3B4 507 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 NFKBIDQ8NI38 313 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ITPAQ9BY32 194 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 TMED5Q9Y3A6 229 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 WRBO00258 174 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ERI3O43414 337 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 BCAS2O75934 225 aaPredicted RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 PIK3CBP42338 1070 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ADAM8P78325 824 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 PCBP2Q15366 365 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 XKR4Q5GH76 650 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 BRAT1Q6PJG6 821 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 TMEM203Q969S6 136 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 PYURFQ96I23 114 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 CHIAQ9BZP6 476 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 PCDHGB7Q9Y5F8 929 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 S100A6P06703 90 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 GSTT2BP0CG30 244 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 DCDC1P59894 354 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 RPL26P61254 145 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 VLDLRP98155 873 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 MMAAQ8IVH4 418 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 LGR4Q9BXB1 951 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 CST11Q9H112 138 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 CARS2Q9HA77 564 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 TAC3Q9UHF0 121 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 PEAK1Q9H792 1746 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 GJA1P17302 382 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 SFT2D3Q587I9 215 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 KIAA1191Q96A73 305 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 CMTM7Q96FZ5 175 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 IL12RB2Q99665 862 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 MOV10Q9HCE1 1003 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 LINGO3P0C6S8 592 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 C2CD4AQ8NCU7 369 aaPredicted RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 SMG8Q8ND04 991 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 LRRC15Q8TF66 581 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 MARK1Q9P0L2 795 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 GIMAP2Q9UG22 337 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 NDUFS4O43181 175 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 DIRAS1O95057 198 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 RENP00797 406 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 HMGN1P05114 100 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 JAG1P78504 1218 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 SH3D19Q5HYK7 790 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 NRSN1Q8IZ57 195 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 SLC22A4Q9H015 551 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 CFAP20Q9Y6A4 193 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 LCHNA4D1U4 455 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ELOA3DA6NLF2 546 aaPredicted RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 CREG1O75629 220 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 RB1P06400 928 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 VIPR1P32241 457 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 GBX2P52951 348 aaPredicted RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ELOA3BQ3SY89 546 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ELOA3Q8NG57 546 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 RNF11Q9Y3C5 154 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 CPNE3O75131 537 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 SLC6A4P31645 630 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 PUM1Q14671 1186 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF366Q8N895 744 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 CAPNS2Q96L46 248 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 MNTQ99583 582 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ACSL1P33121 698 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 CDK6Q00534 326 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 SPANXN4Q5MJ08 99 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 PRPF38BQ5VTL8 546 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 QSOX2Q6ZRP7 698 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 PLD6Q8N2A8 252 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 BRI3BPQ8WY22 251 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 HSH2DQ96JZ2 352 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 CNDP2Q96KP4 475 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 NSUN3Q9H649 340 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 KDELR3O43731 214 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ARCN1P48444 511 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 MYLK3Q32MK0 819 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF678Q5SXM1 525 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 LRRC66Q68CR7 880 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ENPP7Q6UWV6 458 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 NATD1Q8N6N6 113 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 TMEM145Q8NBT3 493 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms