RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MUL1Q969V5 352 aa24.3■■□□□ 1.48
ROM1-201ENST00000278833 C11orf24Q96F05 449 aaPredicted RBP24.3■■□□□ 1.48
ROM1-201ENST00000278833 TRIT1Q9H3H1 467 aaKnown RBP24.3■■□□□ 1.48
ROM1-201ENST00000278833 PREBQ9HCU5 417 aa24.3■■□□□ 1.48
ROM1-201ENST00000278833 PALMDQ9NP74 551 aa24.3■■□□□ 1.48
ROM1-201ENST00000278833 GPRC5BQ9NZH0 403 aa24.3■■□□□ 1.48
ROM1-201ENST00000278833 PSIP1O75475 530 aaKnown RBP24.29■■□□□ 1.48
ROM1-201ENST00000278833 HTR1AP08908 422 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 MATN1P21941 496 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 DDX6P26196 483 aaKnown RBP eCLIP24.29■■□□□ 1.48
ROM1-201ENST00000278833 ENTPD1P49961 510 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 VAC14Q08AM6 782 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 E2F2Q14209 437 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 ZNF829Q3KNS6 432 aaPredicted RBP24.29■■□□□ 1.48
ROM1-201ENST00000278833 CAMKMTQ7Z624 323 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 RBM23Q86U06 439 aaKnown RBP24.29■■□□□ 1.48
ROM1-201ENST00000278833 ASZ1Q8WWH4 475 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 ATL1Q8WXF7 558 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 BORCS5Q969J3 196 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 THAP11Q96EK4 314 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 PHF12Q96QT6 1004 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 DCUN1D5Q9BTE7 237 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 SLC46A2Q9BY10 475 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 BRF2Q9HAW0 419 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 IL1RAPQ9NPH3 570 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 TBCCD1Q9NVR7 557 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 MBD1Q9UIS9 605 aaPredicted RBP24.29■■□□□ 1.48
ROM1-201ENST00000278833 RPS6KA6Q9UK32 745 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 FAF1Q9UNN5 650 aaPredicted RBP24.29■■□□□ 1.48
ROM1-201ENST00000278833 RUVBL1Q9Y265 456 aaKnown RBP24.29■■□□□ 1.48
ROM1-201ENST00000278833 SLC22A14Q9Y267 594 aa24.29■■□□□ 1.48
ROM1-201ENST00000278833 HEMK1Q9Y5R4 338 aaPredicted RBP24.29■■□□□ 1.48
ROM1-201ENST00000278833 H0YIV9 168 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 PABPC1P11940 636 aaKnown RBP24.28■■□□□ 1.48
ROM1-201ENST00000278833 IL7RP16871 459 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 NEK2P51955 445 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 TPD52P55327 224 aaPredicted RBP24.28■■□□□ 1.48
ROM1-201ENST00000278833 WNT3P56703 355 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 CHIT1Q13231 466 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 LAPTM5Q13571 262 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 KEAP1Q14145 624 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 UGT8Q16880 541 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 GRHL2Q6ISB3 625 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 KLHL35Q6PF15 583 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 CHST15Q7LFX5 561 aaPredicted RBP24.28■■□□□ 1.48
ROM1-201ENST00000278833 KIAA0907Q7Z7F0 614 aaPredicted RBP24.28■■□□□ 1.48
ROM1-201ENST00000278833 ZDHHC21Q8IVQ6 265 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 ZZZ3Q8IYH5 903 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 HS3ST5Q8IZT8 346 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 SETD9Q8NE22 299 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 GLMNQ92990 594 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 APOLD1Q96LR9 279 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 NAA50Q9GZZ1 169 aaKnown RBP24.28■■□□□ 1.48
ROM1-201ENST00000278833 GALNT8Q9NY28 637 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 SLC1A7O00341 560 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 B4GAT1O43505 415 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 HS6ST1O60243 411 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 NOBOXO60393 691 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 E2F6O75461 281 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 HNF4AP41235 474 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 VMACQ2NL98 169 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 PGS1Q32NB8 556 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 LRIT3Q3SXY7 679 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 FGD3Q5JSP0 725 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 ASTLQ6HA08 431 aaPredicted RBP24.28■■□□□ 1.48
ROM1-201ENST00000278833 OR4F3Q6IEY1 312 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 ANKRD26P1Q6NSI1 321 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 DOK6Q6PKX4 331 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 LHPPQ9H008 270 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 PSME2Q9UL46 239 aa24.28■■□□□ 1.48
ROM1-201ENST00000278833 CHD9Q3L8U1 2897 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 A0A1W2PRU2 124 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 UGT2B11O75310 529 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 VASPP50552 380 aaPredicted RBP24.27■■□□□ 1.48
ROM1-201ENST00000278833 CXCR4P61073 352 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 SEMG2Q02383 582 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 VEZF1Q14119 521 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 MOGQ16653 247 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 SERPINA13PQ6UXR4 307 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 PIWIL3Q7Z3Z3 882 aaKnown RBP24.27■■□□□ 1.48
ROM1-201ENST00000278833 VPS35Q96QK1 796 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 REXO4Q9GZR2 422 aaKnown RBP24.27■■□□□ 1.48
ROM1-201ENST00000278833 ADNPQ9H2P0 1102 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 FAM83DQ9H4H8 585 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 AASDHPPTQ9NRN7 309 aa24.27■■□□□ 1.48
ROM1-201ENST00000278833 NRG2O14511 850 aaPredicted RBP24.26■■□□□ 1.47
ROM1-201ENST00000278833 TLL1O43897 1013 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 MRPS14O60783 128 aaKnown RBP24.26■■□□□ 1.47
ROM1-201ENST00000278833 EPN2O95208 641 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 MYOGP15173 224 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 PBX2P40425 430 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 GALK1P51570 392 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 HENMT1Q5T8I9 393 aaKnown RBP24.26■■□□□ 1.47
ROM1-201ENST00000278833 OR2T5Q6IEZ7 315 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 CAPN13Q6MZZ7 669 aaPredicted RBP24.26■■□□□ 1.47
ROM1-201ENST00000278833 CHST14Q8NCH0 376 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 PIK3C3Q8NEB9 887 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 OR2A12Q8NGT7 310 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 OR2T29Q8NH02 315 aa24.26■■□□□ 1.47
ROM1-201ENST00000278833 HCAR2Q8TDS4 363 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms