RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PLEKHA6Q9Y2H5 1048 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 NR2E3Q9Y5X4 410 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SMIM28A0A1B0GU29 152 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 FAM189A1O60320 539 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 KCNJ11Q14654 390 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ERMP1Q7Z2K6 904 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TRIM74Q86UV6 250 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TRIM73Q86UV7 250 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TIMM22Q9Y584 194 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TSPAN1O60635 241 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 HK1P19367 917 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 GABRR2P28476 465 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TMBIM6P55061 237 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TAS2R50P59544 299 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 DSTNP60981 165 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 DEFA5Q01523 94 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 NALCNQ8IZF0 1738 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 NXPE1Q8N323 547 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 C12orf43Q96C57 262 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TTYH3Q9C0H2 523 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 RNF208Q9H0X6 261 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 FANCFQ9NPI8 374 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 MST1RQ04912 1400 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TEX13CA0A0J9YWL9 993 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 EI24O14681 340 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 FPR1P21462 350 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 MTPNP58546 118 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 BRAT1Q6PJG6 821 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 PAQR7Q86WK9 346 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF676Q8N7Q3 588 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 S100A16Q96FQ6 103 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TMEM80Q96HE8 168 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 CGREF1Q99674 301 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 FAM120CQ9NX05 1096 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 VPS29Q9UBQ0 182 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 WASF3Q9UPY6 502 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 EXOSC1Q9Y3B2 195 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 DLGAP1O14490 977 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 OR4F21O95013 312 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 PGLSO95336 258 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 GPAT4Q86UL3 456 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 REM2Q8IYK8 340 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 FUBP3Q96I24 572 aaKnown RBP eCLIP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 GPR20Q99678 358 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SERINC1Q9NRX5 453 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 CSNK2A2P19784 350 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 PROZP22891 400 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 GABARAPL2P60520 117 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF45Q02386 682 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF630Q2M218 657 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 OGFRL1Q5TC84 451 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 EPGNQ6UW88 154 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 UBE2Q1Q7Z7E8 422 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 OR2L2Q8NH16 312 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 KCNN1Q92952 543 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 PHB2Q99623 299 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ADAMTS10Q9H324 1103 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ELOVL2Q9NXB9 296 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 GTF2IRD1Q9UHL9 959 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ADM5C9JUS6 153 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 K7EPI3 171 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 STBD1O95210 358 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ERVK-21P61565 698 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ECM1Q16610 540 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TATDN1Q6P1N9 297 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SHQ1Q6PI26 577 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 NPAS4Q8IUM7 802 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ING5Q8WYH8 240 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SLC7A6OSQ96CW6 309 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 FUZQ9BT04 418 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ENY2Q9NPA8 101 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 CPSF4LA6NMK7 179 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF726A6NNF4 738 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ABCB7O75027 752 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 INMTO95050 263 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MT-ND1P03886 318 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MT-ND5P03915 603 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ITGB1P05556 798 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 SNHG28P0DPA3 235 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 RHBDL3P58872 404 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 S100A10P60903 97 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 PUM1Q14671 1186 aaKnown RBP eCLIP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 RPL13AP3Q6NVV1 102 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 AMZ2Q86W34 360 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 CLIP4Q8N3C7 705 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 NKD1Q969G9 470 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 TMEM168Q9H0V1 697 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MYNNQ9NPC7 610 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 DUS2Q9NX74 493 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ACTR3BQ9P1U1 418 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 RHPN2P1A8MT19 583 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 INAVAQ3KP66 663 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ALG10Q5BKT4 473 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 TOR1AIP1Q5JTV8 583 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 SDHAF4Q5VUM1 108 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 RBM23Q86U06 439 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 SLC37A3Q8NCC5 494 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 DENND1AQ8TEH3 1009 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms