RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 GOLGA8MH3BSY2 632 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 SOCS6O14544 535 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 NRDCO43847 1150 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 KLHL41O60662 606 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 LILRA1O75019 489 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 IPO13O94829 963 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 HSD17B2P37059 387 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 MAGEA3P43357 314 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 PRDX1Q06830 199 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 AIMP2Q13155 320 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 CTBP1Q13363 440 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 THOC5Q13769 683 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 ARHGAP19Q14CB8 494 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 PRTGQ2VWP7 1150 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 PRR30Q53SZ7 412 aaPredicted RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 ZNF470Q6ECI4 717 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 ZNF549Q6P9A3 640 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 CCDC137Q6PK04 289 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 KIRREL2Q6UWL6 708 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 RNF44Q7L0R7 432 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 DENND6AQ8IWF6 608 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 REXO1L1PQ8IX06 675 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 AGGF1Q8N302 714 aaeCLIP9.29□□□□□ -0.92
VPS41-201ENST00000265745 DTWD1Q8N5C7 304 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 TTC29Q8NA56 475 aaPredicted RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 GIMAP7Q8NHV1 300 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 ASB11Q8WXH4 323 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 KCNJ9Q92806 393 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 C19orf60Q96EN9 201 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 SIGLEC10Q96LC7 697 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 PKP4Q99569 1192 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 SLC30A3Q99726 388 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 ZFYVE21Q9BQ24 234 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 DPH7Q9BTV6 452 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 ACAT2Q9BWD1 397 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 SAP130Q9H0E3 1048 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 ZBTB20Q9HC78 741 aaPredicted RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 FAM114A2Q9NRY5 505 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 CTSFQ9UBX1 484 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 ZC3H7BQ9UGR2 993 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 CDC23Q9UJX2 597 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 FBXL4Q9UKA2 621 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 NXT1Q9UKK6 140 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 B3GNT3Q9Y2A9 372 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 HS3ST3B1Q9Y662 390 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 MAU2Q9Y6X3 613 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 SPENQ96T58 3664 aaKnown RBP9.29□□□□□ -0.92
VPS41-201ENST00000265745 DOPEY2Q9Y3R5 2298 aa9.29□□□□□ -0.92
VPS41-201ENST00000265745 IGKV1-8A0A0C4DH67 115 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 CTAGE9A4FU28 777 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 E5RI56 91 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 H0YGG7 62 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 GFYI3L273 518 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 KIF5CO60282 957 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 USP1O94782 785 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 SLC16A8O95907 504 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 CATP04040 527 aaKnown RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 EIF2S1P05198 315 aaKnown RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 F7P08709 466 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 GP1BBP13224 206 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 CMPK1P30085 196 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 PNLIPRP1P54315 467 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 ARF3P61204 181 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 NAA25Q14CX7 972 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 LONRF1Q17RB8 773 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 TTLL9Q3SXZ7 439 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 CRB2Q5IJ48 1285 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 TBCELQ5QJ74 424 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 FHL5Q5TD97 284 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 PRAMEF13Q5VWM6 474 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 PRMT9Q6P2P2 845 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 SUSD1Q6UWL2 747 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 CYHR1Q6ZMK1 362 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 Q6ZS92 163 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 SHISA6Q6ZSJ9 500 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 NEK10Q6ZWH5 1172 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 SPNS2Q8IVW8 549 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 METTL27Q8N6F8 245 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 NAT8LQ8N9F0 302 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 FBXO15Q8NCQ5 510 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 OR11G2Q8NGC1 345 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 COG1Q8WTW3 980 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 ZNF669Q96BR6 464 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 NAP1L3Q99457 506 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 PLCD4Q9BRC7 762 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 SOX17Q9H6I2 414 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 SYNPO2LQ9H987 977 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 ZNF304Q9HCX3 659 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 SLC6A20Q9NP91 592 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 MRPS30Q9NP92 439 aaKnown RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 FBXO6Q9NRD1 293 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 SEMA3GQ9NS98 782 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 STOX2Q9P2F5 926 aaPredicted RBP9.28□□□□□ -0.92
VPS41-201ENST00000265745 DHRS7Q9Y394 339 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 FAM169AQ9Y6X4 670 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 MED13Q9UHV7 2174 aa9.28□□□□□ -0.92
VPS41-201ENST00000265745 IGLV3-12A0A075B6K2 115 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 BLACEA4D250 179 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ZNF839A8K0R7 811 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms