RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PMS2P1A4D2B8 440 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 KRT87PA6NCN2 255 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 A8MT66 165 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 LMO7DNF2Z398 122 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 G3V2L1 256 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 MYO1CO00159 1063 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 AGFG2O95081 481 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 GUCA1CO95843 209 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 BPGMP07738 259 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 ANXA6P08133 673 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 HIST1H2AGP0C0S8 130 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 DHRS4L1P0CG22 281 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TPBGLP0DKB5 382 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 GFAPP14136 432 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 SLC2A4P14672 509 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 CPA3P15088 417 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 HIST1H2ADP20671 130 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 ATP5F1P24539 256 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 CD82P27701 267 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 KCNC1P48547 511 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 POLE2P56282 527 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 AP1S2P56377 157 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 KRT33BQ14525 404 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 DEFB133Q30KQ1 61 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 CCSMST1Q4G0I0 132 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 MBOAT1Q6ZNC8 495 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TAX1BP1Q86VP1 789 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 SFTPA2Q8IWL1 248 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 PTGR2Q8N8N7 351 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 PDPRQ8NCN5 879 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 FBXO15Q8NCQ5 510 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 FAM46DQ8NEK8 389 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 OR5K2Q8NHB8 316 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 MAGEC3Q8TD91 643 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 ZDHHC1Q8WTX9 485 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 DYDC1Q8WWB3 177 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 PATE1Q8WXA2 126 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 CXorf40BQ96DE9 158 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 HIST1H2AHQ96KK5 128 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TMEM74Q96NL1 305 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 PHF12Q96QT6 1004 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 FERD3LQ96RJ6 166 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 GFM1Q96RP9 751 aaKnown RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 HIST1H2AJQ99878 128 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 EGFL8Q99944 293 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 CCDC3Q9BQI4 270 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 H2AFJQ9BTM1 129 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 MECRQ9BV79 373 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TRIM54Q9BYV2 358 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 RDH14Q9HBH5 336 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 POT1Q9NUX5 634 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 SIRPGQ9P1W8 387 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 CIDEBQ9UHD4 219 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TMCO1Q9UM00 188 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 PLAGL1Q9UM63 463 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TDRKHQ9Y2W6 561 aaKnown RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 HEBP2Q9Y5Z4 205 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 U3KQA8 63 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 TDRD6O60522 2096 aaKnown RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 TRBV23OR9-2A0A075B6M9 112 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 KIR2DS5A0A0G2JLQ3 304 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 PRAMEF33A0A0G2JMD5 474 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 A0A0G2JNG1 304 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 OR5K4A6NMS3 321 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 KIR2DS3K7RE56 304 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 POLR3GO15318 223 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 YY2O15391 372 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 DLX3O60479 287 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 ANXA5P08758 320 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 MTHFD2P13995 350 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 ALDH3A1P30838 453 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 MAZP56270 477 aaKnown RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 UBE2IP63279 158 aaKnown RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 CYP4F2P78329 520 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 CDKL1Q00532 357 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 PRKG2Q13237 762 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 GRB7Q14451 532 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 KIR2DS5Q14953 304 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 PFKFB4Q16877 469 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 LIPMQ5VYY2 423 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 TTC23LQ6PF05 361 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 IYDQ6PHW0 289 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 MTERF4Q7Z6M4 381 aaKnown RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 VASH2Q86V25 355 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 SLC22A9Q8IVM8 553 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 C10orf107Q8IVU9 208 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 TRIM48Q8IWZ4 208 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 TBC1D21Q8IYX1 336 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 NAGSQ8N159 534 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 TCAIMQ8N3R3 496 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 SDR16C5Q8N3Y7 309 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 KYQ8NBH2 561 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 PHC3Q8NDX5 983 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 MCOLN3Q8TDD5 553 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 SLC37A2Q8TED4 501 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 SREK1Q8WXA9 508 aaKnown RBP9.09□□□□□ -0.95
PHGDH-228ENST00000641847 RAD51AP1Q96B01 352 aa9.09□□□□□ -0.95
PHGDH-228ENST00000641847 PHF21BQ96EK2 531 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms