RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 IL21RQ9HBE5 538 aa9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 FGF22Q9HCT0 170 aa9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 PFDN4Q9NQP4 134 aa9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 GIMAP2Q9UG22 337 aa9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 LNPEPQ9UIQ6 1025 aa9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 BTRCQ9Y297 605 aa9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 ARHGEF17Q96PE2 2063 aaPredicted RBP9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 SNRNP200O75643 2136 aaKnown RBP9.21□□□□□ -0.93
PDLIM5-223ENST00000627587 TP53BP1Q12888 1972 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 DSPP15924 2871 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 TRABD2BA6NFA1 517 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 FPGTO14772 594 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 ALDOCP09972 364 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 PRR35P0CG20 571 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 CALB2P22676 271 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 KCNJ2P63252 427 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 DMPKQ09013 629 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 GCNT7Q6ZNI0 430 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 MILR1Q7Z6M3 343 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 DDIASQ8IXT1 998 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 KLHDC8AQ8IYD2 350 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 KIF2BQ8N4N8 673 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 CPSF7Q8N684 471 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 CDYL2Q8N8U2 506 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 LMNTD1Q8N9Z9 388 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 TMEM145Q8NBT3 493 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 FBXO15Q8NCQ5 510 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 SNX19Q92543 992 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 UTP4Q969X6 686 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 NSL1Q96IY1 281 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 CATSPER2Q96P56 530 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 OR4K3Q96R72 315 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 PKP4Q99569 1192 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 MIPEPQ99797 713 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 ORAI3Q9BRQ5 295 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 NTMT1Q9BV86 223 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 ATG10Q9H0Y0 220 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 LRMDAQ9H2I8 198 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 AKTIPQ9H8T0 292 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 TM9SF3Q9HD45 589 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 MRGBPQ9NV56 204 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 INTS7Q9NVH2 962 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 TOR4AQ9NXH8 423 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 STOX2Q9P2F5 926 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 POLG2Q9UHN1 485 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 MOSPD1Q9UJG1 213 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 WDR37Q9Y2I8 494 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 PLEKHM1Q9Y4G2 1056 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 CCL27Q9Y4X3 112 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 PCDHGA1Q9Y5H4 931 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 SLCO1B1Q9Y6L6 691 aa9.21□□□□□ -0.94
PDLIM5-223ENST00000627587 KCNE1BA0A087WTH5 132 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 MYO1CO00159 1063 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 YKT6O15498 198 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 WDR47O94967 919 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 ENO1P06733 434 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 CAPN1P07384 714 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 HOXC4P09017 264 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 LINC00032P0C843 101 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 ESRRAP11474 423 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 KELP23276 732 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 AKT2P31751 481 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 C21orf59P57076 290 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 RACK1P63244 317 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 KLF10Q13118 480 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 NAA25Q14CX7 972 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 PYCR3Q53H96 274 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 SCIMPQ6UWF3 145 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 RINLQ6ZS11 566 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 Q6ZSR9 355 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 CHST15Q7LFX5 561 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 GALNT13Q8IUC8 556 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 LRRC56Q8IYG6 542 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 METTL6Q8TCB7 284 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 MAGEC3Q8TD91 643 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 KLHL29Q96CT2 875 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 CCT7Q99832 543 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 TIMM29Q9BSF4 260 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 MENTQ9BUN1 341 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 SUFUQ9UMX1 484 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 PSMD13Q9UNM6 376 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 SLC22A14Q9Y267 594 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 RNF11Q9Y3C5 154 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 SNX11Q9Y5W9 270 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 CAPN7Q9Y6W3 813 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 DMXL2Q8TDJ6 3036 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 HEATR5BQ9P2D3 2071 aa9.2□□□□□ -0.94
PDLIM5-223ENST00000627587 A0A087WV48 116 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 IFRD1O00458 451 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 VILLO15195 856 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 KCNJ13O60928 360 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 VPS4BO75351 444 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 RPN2P04844 631 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 EBLN1P0CF75 366 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 ACP5P13686 325 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 HGFP14210 728 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CD22P20273 847 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms