RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 MFRPQ9BY79 579 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 ATP13A2Q9NQ11 1180 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 SLAMF7Q9NQ25 335 aa21.82■■□□□ 1.08
CDKN2A-212ENST00000578845 PGRMC1O00264 195 aaKnown RBP21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 SOCS6O14544 535 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 NRP2O60462 931 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 USP1O94782 785 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 CATP04040 527 aaKnown RBP21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 CMPK1P30085 196 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 HSD17B2P37059 387 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 AIMP2Q13155 320 aaKnown RBP21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 TTLL9Q3SXZ7 439 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 PRMT9Q6P2P2 845 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 AGGF1Q8N302 714 aaeCLIP21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 NAT8LQ8N9F0 302 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 GIMAP7Q8NHV1 300 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 PSMG3-AS1Q96PY0 264 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 SLC30A3Q99726 388 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 ZFYVE21Q9BQ24 234 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 SLC6A20Q9NP91 592 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 CTSFQ9UBX1 484 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 HS3ST3B1Q9Y662 390 aa21.81■■□□□ 1.08
CDKN2A-212ENST00000578845 UTP20O75691 2785 aaKnown RBP21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 LOC105369274A0A096LPK9 316 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 LOC102723532A0A0G2JNH3 316 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 A0A0J9YVX5 310 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 HYKKA2RU49 373 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 MED26O95402 600 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 ATXN8OSP0DMR3 200 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 GNLYP22749 145 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 FNTAP49354 379 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 EMP3P54852 163 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 YBX1P67809 324 aaKnown RBP21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 THOC5Q13769 683 aaKnown RBP21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 PRTGQ2VWP7 1150 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 PRR30Q53SZ7 412 aaPredicted RBP21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 DENND6AQ8IWF6 608 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 REXO1L1PQ8IX06 675 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 OR4N4Q8N0Y3 316 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 ACTRT1Q8TDG2 376 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 COL26A1Q96A83 441 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 PLCD4Q9BRC7 762 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 DPH7Q9BTV6 452 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 SEMA3GQ9NS98 782 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 TSR3Q9UJK0 312 aaKnown RBP21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 FBXL4Q9UKA2 621 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 B3GNT3Q9Y2A9 372 aa21.8■■□□□ 1.08
CDKN2A-212ENST00000578845 SPTBN1Q01082 2364 aaKnown RBP21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 IGKV1-8A0A0C4DH67 115 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 ZNF839A8K0R7 811 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 SLC1A2P43004 574 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 OR1D4P47884 311 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 FBXO42Q6P3S6 717 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 ZNF549Q6P9A3 640 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 ASB11Q8WXH4 323 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 TM9SF4Q92544 642 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 SIGLEC10Q96LC7 697 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 C10orf90Q96M02 699 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 PKP4Q99569 1192 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 ACAT2Q9BWD1 397 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 FBXO6Q9NRD1 293 aaPredicted RBP21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 LUZP4Q9P127 313 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 CDC23Q9UJX2 597 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 COMMD10Q9Y6G5 202 aa21.79■■□□□ 1.08
CDKN2A-212ENST00000578845 IGLV3-12A0A075B6K2 115 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 CTAGE9A4FU28 777 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 GOLGA8MH3BSY2 632 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 GFYI3L273 518 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 MASP2O00187 686 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 KIF5CO60282 957 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 MPC1LP0DKB6 136 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 ENO3P13929 434 aaPredicted RBP21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 RPA3P35244 121 aaPredicted RBP21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 PNLIPRP1P54315 467 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 RELAQ04206 551 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 PRDX1Q06830 199 aaKnown RBP21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 CTBP1Q13363 440 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 LONRF1Q17RB8 773 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 MUM1Q2TAK8 710 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 PLEKHN1Q494U1 663 aaPredicted RBP21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 PRAMEF13Q5VWM6 474 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 ZNF425Q6IV72 752 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 SUSD1Q6UWL2 747 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 KIRREL2Q6UWL6 708 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 PAQR7Q86WK9 346 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 IQCKQ8N0W5 287 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 DTWD1Q8N5C7 304 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 CALML6Q8TD86 181 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 GRK7Q8WTQ7 553 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 ZNF304Q9HCX3 659 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 MRPS30Q9NP92 439 aaKnown RBP21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 ZC3H7BQ9UGR2 993 aaKnown RBP21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 DHRS7Q9Y394 339 aa21.78■■□□□ 1.08
CDKN2A-212ENST00000578845 E7ENX8 843 aa21.77■■□□□ 1.08
CDKN2A-212ENST00000578845 EIF3FO00303 357 aaPredicted RBP21.77■■□□□ 1.08
CDKN2A-212ENST00000578845 CES2O00748 559 aa21.77■■□□□ 1.08
CDKN2A-212ENST00000578845 VPS26AO75436 327 aa21.77■■□□□ 1.08
CDKN2A-212ENST00000578845 SLC16A8O95907 504 aa21.77■■□□□ 1.08
CDKN2A-212ENST00000578845 GP1BBP13224 206 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms