RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ANKRD12Q6UB98 2062 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 BSNQ9UPA5 3926 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 IGKV1-8A0A0C4DH67 115 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 EIF3HO15372 352 aaKnown RBP eCLIP12.49□□□□□ -0.415e-7■■□□□ 12.6
CNOT1-220ENST00000569916 C8GP07360 202 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 SFTPCP11686 197 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 AGXTP21549 392 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-220ENST00000569916 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
CNOT1-220ENST00000569916 SP140Q13342 867 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
CNOT1-220ENST00000569916 TSTA3Q13630 321 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-220ENST00000569916 NAA25Q14CX7 972 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 FAM69BQ5VUD6 431 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 ICE2Q659A1 982 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 FRMPD2BQ6IN97 320 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 CAPN12Q6ZSI9 719 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 SLC26A11Q86WA9 606 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 ADAMTS17Q8TE56 1095 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 LINGO1Q96FE5 620 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 SELENOSQ9BQE4 189 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 DPH7Q9BTV6 452 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 NDC1Q9BTX1 674 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 RAB17Q9H0T7 212 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 MRPS30Q9NP92 439 aaKnown RBP12.49□□□□□ -0.41
CNOT1-220ENST00000569916 SAYSD1Q9NPB0 183 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 STARD5Q9NSY2 213 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 TXLNGQ9NUQ3 528 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 STOX2Q9P2F5 926 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-220ENST00000569916 ANKMY1Q9P2S6 941 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 TUBD1Q9UJT1 453 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 CDC23Q9UJX2 597 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 SNX7Q9UNH6 387 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 PDE10AQ9Y233 779 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 VWA7Q9Y334 891 aa12.49□□□□□ -0.41
CNOT1-220ENST00000569916 UTP11Q9Y3A2 253 aaKnown RBP12.49□□□□□ -0.41
CNOT1-220ENST00000569916 A0A0J9YVX5 310 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 FITM1A5D6W6 292 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 C9J4A7 227 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 SLC16A5O15375 505 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 ITGAXP20702 1163 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 SSTR1P30872 391 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 ARSFP54793 590 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 TBPL1P62380 186 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 PRDX1Q06830 199 aaKnown RBP12.48□□□□□ -0.41
CNOT1-220ENST00000569916 TRADDQ15628 312 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 PHKG1Q16816 387 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 NKAIN1Q4KMZ8 207 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 TCTE1Q5JU00 501 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 ZNF425Q6IV72 752 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 ZDHHC24Q6UX98 284 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 MBOAT1Q6ZNC8 495 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 STRA8Q7Z7C7 330 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 ZC3HC1Q86WB0 502 aaKnown RBP12.48□□□□□ -0.41
CNOT1-220ENST00000569916 PAQR7Q86WK9 346 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 FBXO25Q8TCJ0 367 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 PYROXD1Q8WU10 500 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 ZFYVE21Q9BQ24 234 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 PLCD4Q9BRC7 762 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 MCMBPQ9BTE3 642 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 DHRS4Q9BTZ2 278 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 PHACTR1Q9C0D0 580 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 SLC25A18Q9H1K4 315 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 SYNPO2LQ9H987 977 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 SMYD2Q9NRG4 433 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 MAN2B2Q9Y2E5 1009 aa12.48□□□□□ -0.41
CNOT1-220ENST00000569916 BOD1L1Q8NFC6 3051 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 LOC105369274A0A096LPK9 316 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 LOC102723532A0A0G2JNH3 316 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 FAM95CA0A1B0GW59 222 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 A0A1B0GX78 115 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 B8ZZF3 427 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 DSCR3O14972 297 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 SRPX2O60687 465 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 CNOT3O75175 753 aaKnown RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 KLF7O75840 302 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 PIAS1O75925 651 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 URI1O94763 535 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 CCNDBP1O95273 360 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 MED26O95402 600 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 ZNF37AP17032 561 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 PMS2P54278 862 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 PLTPP55058 493 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 VSX2P58304 361 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 IL2P60568 153 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 DCDP81605 110 aaKnown RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 CAV1Q03135 178 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 NFATC3Q12968 1075 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 GRM7Q14831 915 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 SLC9A5Q14940 896 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 YOD1Q5VVQ6 348 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 C8orf74Q6P047 294 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 FBXO42Q6P3S6 717 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 TMEM207Q6UWW9 146 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 TTLL10Q6ZVT0 673 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 APLFQ8IW19 511 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 OR4N4Q8N0Y3 316 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 TTC29Q8NA56 475 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 MCOLN3Q8TDD5 553 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms