RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SOX17Q9H6I2 414 aaPredicted RBP18.07■□□□□ 0.48
SPSB3-210ENST00000568416 ZBTB20Q9HC78 741 aaPredicted RBP18.07■□□□□ 0.48
SPSB3-210ENST00000568416 FAM114A2Q9NRY5 505 aa18.07■□□□□ 0.48
SPSB3-210ENST00000568416 ZC3H7BQ9UGR2 993 aaKnown RBP18.07■□□□□ 0.48
SPSB3-210ENST00000568416 B3GNT3Q9Y2A9 372 aa18.07■□□□□ 0.48
SPSB3-210ENST00000568416 MED16Q9Y2X0 877 aa18.07■□□□□ 0.48
SPSB3-210ENST00000568416 JRKLQ9Y4A0 524 aa18.07■□□□□ 0.48
SPSB3-210ENST00000568416 HECTD1Q9ULT8 2610 aa18.07■□□□□ 0.48
SPSB3-210ENST00000568416 SDR42E2A6NKP2 422 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 E5RI56 91 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 ALOX12BO75342 701 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 USP1O94782 785 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 COILP38432 576 aaPredicted RBP18.06■□□□□ 0.48
SPSB3-210ENST00000568416 ARHGAP19Q14CB8 494 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 PRTGQ2VWP7 1150 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 PRAMEF13Q5VWM6 474 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 ZNF470Q6ECI4 717 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 PRMT9Q6P2P2 845 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 SUSD1Q6UWL2 747 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 KIRREL2Q6UWL6 708 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 Q6ZS92 163 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 SHISA6Q6ZSJ9 500 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 NEK10Q6ZWH5 1172 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 IQCKQ8N0W5 287 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 GIMAP7Q8NHV1 300 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 TM9SF4Q92544 642 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 INPP5DQ92835 1189 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 SNRNP40Q96DI7 357 aaKnown RBP18.06■□□□□ 0.48
SPSB3-210ENST00000568416 SERPINB12Q96P63 405 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 PKP4Q99569 1192 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 ACAT2Q9BWD1 397 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 SLC29A3Q9BZD2 475 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 XAB2Q9HCS7 855 aaKnown RBP18.06■□□□□ 0.48
SPSB3-210ENST00000568416 ZNF304Q9HCX3 659 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 SEMA3GQ9NS98 782 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 KLHL42Q9P2K6 505 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 MAU2Q9Y6X3 613 aa18.06■□□□□ 0.48
SPSB3-210ENST00000568416 AGFG2O95081 481 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 CATP04040 527 aaKnown RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 F7P08709 466 aaPredicted RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 ITGA3P26006 1051 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 MAGEA3P43357 314 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 MRPL49Q13405 166 aaKnown RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 THOC5Q13769 683 aaKnown RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 TTLL9Q3SXZ7 439 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 CRB2Q5IJ48 1285 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 ZNF549Q6P9A3 640 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 CCDC137Q6PK04 289 aaKnown RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 PAQR7Q86WK9 346 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 DENND6AQ8IWF6 608 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 AGGF1Q8N302 714 aaeCLIP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 ZADH2Q8N4Q0 377 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 FBXO15Q8NCQ5 510 aaPredicted RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 C10orf90Q96M02 699 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 PLCD4Q9BRC7 762 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 SYNPO2LQ9H987 977 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 LRRC4CQ9HCJ2 640 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 MRPS30Q9NP92 439 aaKnown RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 FBXO6Q9NRD1 293 aaPredicted RBP18.05■□□□□ 0.48
SPSB3-210ENST00000568416 MAP10Q9P2G4 905 aa18.05■□□□□ 0.48
SPSB3-210ENST00000568416 IGKV1-8A0A0C4DH67 115 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 CTAGE9A4FU28 777 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 H0YGG7 62 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 GOLGA8MH3BSY2 632 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 NRDCO43847 1150 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 KIF5CO60282 957 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 PHF2O75151 1096 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 SEMA7AO75326 666 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 EIF2S1P05198 315 aaKnown RBP18.04■□□□□ 0.48
SPSB3-210ENST00000568416 MPC1LP0DKB6 136 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 RPA3P35244 121 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-210ENST00000568416 HSD17B2P37059 387 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 PNLIPRP1P54315 467 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 EMP3P54852 163 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 ARF3P61204 181 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-210ENST00000568416 CTBP1Q13363 440 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 RBBP7Q16576 425 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 MUM1Q2TAK8 710 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 TUBB8Q3ZCM7 444 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 ZNF425Q6IV72 752 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 IGFL2Q6UWQ7 119 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 SPNS2Q8IVW8 549 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 REXO1L1PQ8IX06 675 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 CISD2Q8N5K1 135 aaKnown RBP18.04■□□□□ 0.48
SPSB3-210ENST00000568416 NAT8LQ8N9F0 302 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 OR11G2Q8NGC1 345 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 STT3BQ8TCJ2 826 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 KCNJ9Q92806 393 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 SIGLEC10Q96LC7 697 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 ILKAPQ9H0C8 392 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-210ENST00000568416 ASF1BQ9NVP2 202 aa18.04■□□□□ 0.48
SPSB3-210ENST00000568416 STOX2Q9P2F5 926 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-210ENST00000568416 SNRNP200O75643 2136 aaKnown RBP18.04■□□□□ 0.48
SPSB3-210ENST00000568416 IGLV3-12A0A075B6K2 115 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 VPS26AO75436 327 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 ERVK-10P10266 1014 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 SLC1A2P43004 574 aa18.03■□□□□ 0.48
SPSB3-210ENST00000568416 CARSP49589 748 aaKnown RBP18.03■□□□□ 0.48
SPSB3-210ENST00000568416 PRDX1Q06830 199 aaKnown RBP18.03■□□□□ 0.48
SPSB3-210ENST00000568416 KLC1Q07866 573 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms