RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF385CQ66K41 422 aaPredicted RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 BPHLQ86WA6 291 aaPredicted RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 MCOLN3Q8TDD5 553 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 CT55Q8WUE5 264 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 CDKL2Q92772 493 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 SLC22A18Q96BI1 424 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 DPH7Q9BTV6 452 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 LHX9Q9NQ69 397 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 PCMTD2Q9NV79 361 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 UTP6Q9NYH9 597 aaKnown RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 MTRF1LQ9UGC7 380 aaKnown RBP13.34□□□□□ -0.27
TPM1-230ENST00000561266 PCDHB3Q9Y5E6 796 aa13.34□□□□□ -0.27
TPM1-230ENST00000561266 A0A0J9YVX5 310 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 OR2A25A4D2G3 310 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 NKX2-8O15522 239 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ZNF500O60304 480 aaPredicted RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 GUCA1CO95843 209 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 FURINP09958 794 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ITGAXP20702 1163 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 CYP2A7P20853 494 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 RPA3P35244 121 aaPredicted RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 ATP1A2P50993 1020 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 FOXL2P58012 376 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 TBPL1P62380 186 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 NFKB2Q00653 900 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 PRDX1Q06830 199 aaKnown RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 SP140Q13342 867 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 NAE1Q13564 534 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 TSNQ15631 228 aaKnown RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 PTCHD3Q3KNS1 767 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ZNF425Q6IV72 752 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 LRRC8EQ6NSJ5 796 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ZNF517Q6ZMY9 492 aaPredicted RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 PAQR7Q86WK9 346 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 PLD3Q8IV08 490 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 DSELQ8IZU8 1212 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ESX1Q8N693 406 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ZNF655Q8N720 491 aaPredicted RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 OR8K5Q8NH50 307 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ZUFSPQ96AP4 578 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 PTERQ96BW5 349 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 PYCR2Q96C36 320 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 CCDC138Q96M89 665 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ZNF285Q96NJ3 590 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 OR4K3Q96R72 315 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 FAM129AQ9BZQ8 928 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 EPB41L4BQ9H329 900 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 ACSS3Q9H6R3 686 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 INTS7Q9NVH2 962 aaKnown RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 DHCR7Q9UBM7 475 aaKnown RBP13.33□□□□□ -0.28
TPM1-230ENST00000561266 SERTAD3Q9UJW9 196 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 PLCL2Q9UPR0 1127 aa13.33□□□□□ -0.28
TPM1-230ENST00000561266 MED13Q9UHV7 2174 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 SCN3AQ9NY46 2000 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 TARM1B6A8C7 271 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 E7EQ34 232 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 MEN1O00255 615 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 CPNE3O75131 537 aaKnown RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 OR2B3O76000 313 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 SLC35E2BP0CK96 405 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 CCDC166P0CW27 439 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 CD1DP15813 335 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 SPRP35270 261 aaPredicted RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 DLSTP36957 453 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 RPS18P62269 152 aaKnown RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 OR4D1Q15615 310 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 TEX35Q5T0J7 233 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 MROH9Q5TGP6 573 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 C1orf189Q5VU69 101 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 RNF44Q7L0R7 432 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 GPR155Q7Z3F1 870 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 RAB42Q8N4Z0 105 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 NKAPQ8N5F7 415 aaKnown RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 OR56A3Q8NH54 315 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 ALKBH8Q96BT7 664 aaKnown RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 UBXN10Q96LJ8 280 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 PLCD4Q9BRC7 762 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 SGPP1Q9BX95 441 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 CHST8Q9H2A9 424 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 ACTR5Q9H9F9 607 aaPredicted RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 GPN2Q9H9Y4 310 aaPredicted RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 SYTL2Q9HCH5 934 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 MRPS30Q9NP92 439 aaKnown RBP13.32□□□□□ -0.28
TPM1-230ENST00000561266 PADI1Q9ULC6 663 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 FAM208BQ5VWN6 2430 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 ATRXP46100 2492 aa13.32□□□□□ -0.28
TPM1-230ENST00000561266 H7BY64 318 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 HAT1O14929 419 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 CNOT3O75175 753 aaKnown RBP13.31□□□□□ -0.28
TPM1-230ENST00000561266 STATHP02808 62 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 NPPBP16860 134 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 STMN1P16949 149 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 TCN2P20062 427 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 GCAP28676 217 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms