RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 IGFL3Q6UXB1 125 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 CENPUQ71F23 418 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 CAND1Q86VP6 1230 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 TMEM151BQ8IW70 566 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 METTL27Q8N6F8 245 aaPredicted RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 OR9A1PQ8NGU1 263 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 VPS50Q96JG6 964 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 PSMG3-AS1Q96PY0 264 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 ZFYVE21Q9BQ24 234 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 ILKAPQ9H0C8 392 aaPredicted RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 SOX17Q9H6I2 414 aaPredicted RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 LRRC4CQ9HCJ2 640 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 XAB2Q9HCS7 855 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 SLC6A20Q9NP91 592 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 FAM237BA0A1B0GVD1 139 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 HYKKA2RU49 373 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 OR2A25A4D2G3 310 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 CTAGE9A4FU28 777 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 ZNF839A8K0R7 811 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 TCP11X1B4DZS4 312 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 MYO1CO00159 1063 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 MASP2O00187 686 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 SOCS6O14544 535 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 VPS26AO75436 327 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 USP1O94782 785 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 RPA3P35244 121 aaPredicted RBP13.54□□□□□ -0.24
SNX6-210ENST00000557341 OR1D4P47884 311 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 THOC5Q13769 683 aaKnown RBP13.54□□□□□ -0.24
SNX6-210ENST00000557341 ARHGAP19Q14CB8 494 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 RBBP7Q16576 425 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 MUM1Q2TAK8 710 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 TUBB8Q3ZCM7 444 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 ACSBG2Q5FVE4 666 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 PRAMEF13Q5VWM6 474 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 PRMT9Q6P2P2 845 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 SHISA6Q6ZSJ9 500 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 NEK10Q6ZWH5 1172 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 RASGEF1CQ8N431 466 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 ZADH2Q8N4Q0 377 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 SMPDL3AQ92484 453 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 MAGOHBQ96A72 148 aaKnown RBP13.54□□□□□ -0.24
SNX6-210ENST00000557341 SERPINB12Q96P63 405 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 NAP1L3Q99457 506 aaPredicted RBP13.54□□□□□ -0.24
SNX6-210ENST00000557341 TRIM56Q9BRZ2 755 aaKnown RBP13.54□□□□□ -0.24
SNX6-210ENST00000557341 DPH7Q9BTV6 452 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 ACAT2Q9BWD1 397 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 CCDC68Q9H2F9 335 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 ZNF304Q9HCX3 659 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 MRPS30Q9NP92 439 aaKnown RBP13.54□□□□□ -0.24
SNX6-210ENST00000557341 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 ZC3H7BQ9UGR2 993 aaKnown RBP13.54□□□□□ -0.24
SNX6-210ENST00000557341 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 NBPF19A0A087WUL8 3843 aa13.54□□□□□ -0.24
SNX6-210ENST00000557341 CNTRLQ7Z7A1 2325 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 LOC105369274A0A096LPK9 316 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 LOC102723532A0A0G2JNH3 316 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 MAGEB16A2A368 324 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 VSTM2BA6NLU5 285 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 ALOX12BO75342 701 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 CCNDBP1O95273 360 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 EIF2S1P05198 315 aaKnown RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 HSD17B2P37059 387 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 CARSP49589 748 aaKnown RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 CLCN7P51798 805 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 OCA2Q04671 838 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 MRPL49Q13405 166 aaKnown RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 TSTA3Q13630 321 aaPredicted RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 PLEKHN1Q494U1 663 aaPredicted RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 CCDC137Q6PK04 289 aaKnown RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 SUSD1Q6UWL2 747 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 OR4N4Q8N0Y3 316 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 DTWD1Q8N5C7 304 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 MCUQ8NE86 351 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 SSC4DQ8WTU2 575 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 KCNJ9Q92806 393 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 SNRNP40Q96DI7 357 aaKnown RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 PBKQ96KB5 322 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 CRB3Q9BUF7 120 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 CUEDC1Q9NWM3 386 aaPredicted RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 UTP6Q9NYH9 597 aaKnown RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 GALPQ9UBC7 116 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 ZNF282Q9UDV7 671 aaPredicted RBP13.53□□□□□ -0.24
SNX6-210ENST00000557341 TAC3Q9UHF0 121 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 JRKLQ9Y4A0 524 aa13.53□□□□□ -0.24
SNX6-210ENST00000557341 SCN2AQ99250 2005 aa13.52□□□□□ -0.24
SNX6-210ENST00000557341 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 GOLGA8MH3BSY2 632 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 PGRMC1O00264 195 aaKnown RBP13.52□□□□□ -0.25
SNX6-210ENST00000557341 MED26O95402 600 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 ENO3P13929 434 aaPredicted RBP13.52□□□□□ -0.25
SNX6-210ENST00000557341 FBLP22087 321 aaKnown RBP13.52□□□□□ -0.25
SNX6-210ENST00000557341 SLC1A2P43004 574 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 PNLIPRP1P54315 467 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 EMP3P54852 163 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.25
SNX6-210ENST00000557341 CUL1Q13616 776 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms