RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TENM4Q6N022 2769 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 A0A1W2PPV9 198 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 EIF3FO00303 357 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 CCNDBP1O95273 360 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 EIF2S1P05198 315 aaKnown RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 HSD17B2P37059 387 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 PGGT1BP53609 377 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 PLTPP55058 493 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 IL2P60568 153 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 YBX1P67809 324 aaKnown RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 DCDP81605 110 aaKnown RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 NFKB2Q00653 900 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 ARHGAP19Q14CB8 494 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 NAA25Q14CX7 972 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 NCF4Q15080 339 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 CRTC2Q53ET0 693 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 TCTE1Q5JU00 501 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 HECTD2Q5U5R9 776 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 FAM69BQ5VUD6 431 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 FAM45BPQ6NSW5 357 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 RHBDD2Q6NTF9 364 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 FAM198BQ6UWH4 519 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 TTLL10Q6ZVT0 673 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 STRA8Q7Z7C7 330 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 OR2A1Q8NGT9 310 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 FAM45AQ8TCE6 357 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF480Q8WV37 535 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 C17orf62Q9BQA9 187 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 NLNQ9BYT8 704 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 ADNPQ9H2P0 1102 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 PLAC1Q9HBJ0 212 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 GEMIN8Q9NWZ8 242 aaKnown RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 IFT80Q9P2H3 777 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 CDC23Q9UJX2 597 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 TCFL5Q9UL49 500 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 CORO1CQ9ULV4 474 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-213ENST00000554600 PADI2Q9Y2J8 665 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 VWA7Q9Y334 891 aa10.23□□□□□ -0.77
SHMT2-213ENST00000554600 FAM95CA0A1B0GW59 222 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 ARGFXA6NJG6 315 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 TARM1B6A8C7 271 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 E7ENX8 843 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 E7ESA3 106 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 GFYI3L273 518 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 TP73O15350 636 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 NRP2O60462 931 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 CTSVO60911 334 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 C8GP07360 202 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 RAB40ALP0C0E4 278 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 HIST1H2AGP0C0S8 130 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 ERGP11308 486 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 HIST1H2ADP20671 130 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 OTX2P32243 289 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 ARSFP54793 590 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 TIAL1Q01085 375 aaKnown RBP eCLIP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 TAP2Q03519 686 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 IL10RAQ13651 578 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 GRM7Q14831 915 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 UGT8Q16880 541 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 NKAIN1Q4KMZ8 207 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 WASHC2DQ5SRD0 308 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 ICE2Q659A1 982 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 DUPD1Q68J44 220 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 FRMPD2BQ6IN97 320 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 C8orf74Q6P047 294 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 CYHR1Q6ZMK1 362 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF517Q6ZMY9 492 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 MBOAT1Q6ZNC8 495 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 PRICKLE2Q7Z3G6 844 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 GALNT7Q86SF2 657 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 METTL27Q8N6F8 245 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 FBXO15Q8NCQ5 510 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 C9orf43Q8TAL5 461 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 PROKR1Q8TCW9 393 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 CDKL2Q92772 493 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 HIST1H2AHQ96KK5 128 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 GBP5Q96PP8 586 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 HIST1H2AJQ99878 128 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 H2AFJQ9BTM1 129 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 TRIM54Q9BYV2 358 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 SLC6A20Q9NP91 592 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 CCDC177Q9NQR7 707 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF71Q9NQZ8 489 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 CUTCQ9NTM9 273 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 NSMCE4AQ9NXX6 385 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 UTP6Q9NYH9 597 aaKnown RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 TXNDC16Q9P2K2 825 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 ADAMTS6Q9UKP5 1117 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 PDE10AQ9Y233 779 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 PTRH2Q9Y3E5 179 aaKnown RBP10.22□□□□□ -0.77
SHMT2-213ENST00000554600 PSAT1Q9Y617 370 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 KCNMB2Q9Y691 235 aa10.22□□□□□ -0.77
SHMT2-213ENST00000554600 LOC105369274A0A096LPK9 316 aa10.21□□□□□ -0.77
SHMT2-213ENST00000554600 LOC102723532A0A0G2JNH3 316 aa10.21□□□□□ -0.77
SHMT2-213ENST00000554600 A0A1B0GX78 115 aa10.21□□□□□ -0.77
SHMT2-213ENST00000554600 B8ZZF3 427 aa10.21□□□□□ -0.77
SHMT2-213ENST00000554600 H3BMH7 237 aa10.21□□□□□ -0.77
SHMT2-213ENST00000554600 MKRN2OSH3BPM6 223 aa10.21□□□□□ -0.77
SHMT2-213ENST00000554600 EIF3HO15372 352 aaKnown RBP eCLIP10.21□□□□□ -0.77
SHMT2-213ENST00000554600 SRPX2O60687 465 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms