RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 S1PR4O95977 384 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 FOSL2P15408 326 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 MAGEA8P43361 318 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 IDH2P48735 452 aaKnown RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ATXN1P54253 815 aaKnown RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ABHD18Q0P651 414 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ARHGAP19Q14CB8 494 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 MINDY4Q4G0A6 757 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SH3PXD2AQ5TCZ1 1133 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 LRRN4CLQ8ND94 238 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 TSPAN14Q8NG11 270 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SLC9A6Q92581 669 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 EZH1Q92800 747 aaPredicted RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 B3GALT6Q96L58 329 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ZNF354BQ96LW1 612 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 MARK1Q9P0L2 795 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 PTGFRNQ9P2B2 879 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 A0A0U1RQJ8 604 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 B4DGG1 531 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 PRAMEF26H0Y7S4 382 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 LEFTY1O75610 366 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SERPINI2O75830 405 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 LRATO95237 230 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 EIF2DP41214 584 aaKnown RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 NUMBP49757 651 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 FAM189BP81408 668 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 FADDQ13158 208 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 RNF44Q7L0R7 432 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ZNF550Q7Z398 422 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 METTL25Q8N6Q8 603 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ZNF540Q8NDQ6 660 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 NOL6Q9H6R4 1146 aaKnown RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SPATA6Q9NWH7 488 aaPredicted RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 LYVE1Q9Y5Y7 322 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SESN1Q9Y6P5 492 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ARHGEF33A8MVX0 844 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 FAM189A1O60320 539 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 RCBTB2O95199 551 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 TOP3BO95985 862 aaKnown RBP9□□□□□ -0.97
PPFIA2-216ENST00000549396 CEP78Q5JTW2 689 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 TMEM63BQ5T3F8 832 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 DCAF12L1Q5VU92 463 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 GK5Q6ZS86 529 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 GOLGA7Q7Z5G4 137 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 ZCCHC7Q8N3Z6 543 aaKnown RBP9□□□□□ -0.97
PPFIA2-216ENST00000549396 OR5P2Q8WZ92 322 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 RDH12Q96NR8 316 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 SMPD3Q9NY59 655 aaPredicted RBP9□□□□□ -0.97
PPFIA2-216ENST00000549396 IRAK3Q9Y616 596 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 SP100P23497 879 aaPredicted RBP9□□□□□ -0.97
PPFIA2-216ENST00000549396 RCVRNP35243 200 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 MAGEA6P43360 314 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 RAB25P57735 213 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 SLC5A9Q2M3M2 681 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 C1orf220Q5T0J3 134 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 ALKAL1Q6UXT8 129 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 FRMD7Q6ZUT3 714 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PIGWQ7Z7B1 504 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 ALYREFQ86V81 257 aaKnown RBP9□□□□□ -0.97
PPFIA2-216ENST00000549396 TMEM234Q8WY98 164 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 FAM3CQ92520 227 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 MARK4Q96L34 752 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 NUAK2Q9H093 628 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PTGES2Q9H7Z7 377 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 NCDNQ9UBB6 729 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 USP3Q9Y6I4 520 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PIAS3Q9Y6X2 628 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 WASHC1A8K0Z3 465 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 WASH3PC4AMC7 463 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 C1GALT1C1LP0DN25 315 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 THRBP10828 461 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 HNRNPA2B1P22626 353 aaKnown RBP9□□□□□ -0.97
PPFIA2-216ENST00000549396 MAT2AP31153 395 aaKnown RBP9□□□□□ -0.97
PPFIA2-216ENST00000549396 ZNF763Q0D2J5 394 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 ARHGAP40Q5TG30 622 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 WASH2PQ6VEQ5 465 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 ATG14Q6ZNE5 492 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 OR7A2PQ8NGA2 310 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 OR5L2Q8NGL0 311 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 SCRN2Q96FV2 425 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PWWP2AQ96N64 755 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 MAPKAP1Q9BPZ7 522 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 MECRQ9BV79 373 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 TBL1XR1Q9BZK7 514 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 HOXD1Q9GZZ0 328 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PCDHGB5Q9Y5G0 923 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 SCDO00767 359 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 ADAMTS3O15072 1205 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 UQCRC2P22695 453 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 ACY1Q03154 408 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 TMEM135Q86UB9 458 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 DENND6BQ8NEG7 585 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PIH1D2Q8WWB5 315 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 PEBP4Q96S96 227 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 HDHD2Q9H0R4 259 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 MAP10Q9P2G4 905 aa9□□□□□ -0.97
PPFIA2-216ENST00000549396 KIR2DS5A0A0G2JLQ3 304 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms