RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SEMA3GQ9NS98 782 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 UTP6Q9NYH9 597 aaKnown RBP14.95□□□□□ -0.02
VPS33A-206ENST00000542310 B3GNT3Q9Y2A9 372 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 NEU2Q9Y3R4 380 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 COMMD10Q9Y6G5 202 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 ZCWPW2A0A1B0GU75 182 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 KRT87PA6NCN2 255 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 VSTM2BA6NLU5 285 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 EIF3FO00303 357 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-206ENST00000542310 SOCS6O14544 535 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 MPC1LP0DKB6 136 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 ERVK-10P10266 1014 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 GP1BBP13224 206 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 GNLYP22749 145 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 COILP38432 576 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-206ENST00000542310 UQCRFS1P47985 274 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 RELAQ04206 551 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 RAPSNQ13702 412 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 THOC5Q13769 683 aaKnown RBP14.94□□□□□ -0.02
VPS33A-206ENST00000542310 FASTKQ14296 549 aaKnown RBP14.94□□□□□ -0.02
VPS33A-206ENST00000542310 MUM1Q2TAK8 710 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 ACSBG2Q5FVE4 666 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 WASHC2DQ5SRD0 308 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 CCDC137Q6PK04 289 aaKnown RBP14.94□□□□□ -0.02
VPS33A-206ENST00000542310 IQCKQ8N0W5 287 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 COG1Q8WTW3 980 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 COL26A1Q96A83 441 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 MVB12AQ96EY5 273 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 CCDC68Q9H2F9 335 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 SLC6A20Q9NP91 592 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 MRPS30Q9NP92 439 aaKnown RBP14.94□□□□□ -0.02
VPS33A-206ENST00000542310 CTSFQ9UBX1 484 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 CDC23Q9UJX2 597 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 FBXL4Q9UKA2 621 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 HS3ST3B1Q9Y662 390 aa14.94□□□□□ -0.02
VPS33A-206ENST00000542310 USP9YO00507 2555 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-206ENST00000542310 SPTBN1Q01082 2364 aaKnown RBP14.93□□□□□ -0.02
VPS33A-206ENST00000542310 SPTAN1Q13813 2472 aaKnown RBP14.93□□□□□ -0.02
VPS33A-206ENST00000542310 NAV2Q8IVL1 2488 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 GOLGA6L10A0A0M3HER8 536 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 HYKKA2RU49 373 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 CTAGE9A4FU28 777 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 CES2O00748 559 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 PRPF4O43172 522 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS33A-206ENST00000542310 RPA3P35244 121 aaPredicted RBP14.93□□□□□ -0.02
VPS33A-206ENST00000542310 SLC1A2P43004 574 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 CARSP49589 748 aaKnown RBP14.93□□□□□ -0.02
VPS33A-206ENST00000542310 PNLIPRP1P54315 467 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 LONRF1Q17RB8 773 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 PRTGQ2VWP7 1150 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 TUBB8Q3ZCM7 444 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 FHL5Q5TD97 284 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 PRAMEF13Q5VWM6 474 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 FRMPD2BQ6IN97 320 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 NAT8LQ8N9F0 302 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 GIMAP7Q8NHV1 300 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 ACTRT1Q8TDG2 376 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 FAM136AQ96C01 138 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 PLCD4Q9BRC7 762 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 TRIM56Q9BRZ2 755 aaKnown RBP14.93□□□□□ -0.02
VPS33A-206ENST00000542310 FAM167BQ9BTA0 163 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 DPH7Q9BTV6 452 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 MFRPQ9BY79 579 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 ZNF304Q9HCX3 659 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 CUEDC1Q9NWM3 386 aaPredicted RBP14.93□□□□□ -0.02
VPS33A-206ENST00000542310 HIVEP3Q5T1R4 2406 aa14.93□□□□□ -0.02
VPS33A-206ENST00000542310 IGLV3-12A0A075B6K2 115 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 A0A0J9YVX5 310 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 CYSRT1A8MQ03 144 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 KIF5CO60282 957 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 NRP2O60462 931 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 EZRP15311 586 aaKnown RBP14.92□□□□□ -0.02
VPS33A-206ENST00000542310 TERF1P54274 439 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 FOXL2P58012 376 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 ABATP80404 500 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 RBBP7Q16576 425 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 PRR30Q53SZ7 412 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-206ENST00000542310 GARNL3Q5VVW2 1013 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 ICE2Q659A1 982 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 ZNF425Q6IV72 752 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 LRRC8EQ6NSJ5 796 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 PAQR7Q86WK9 346 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 DENND6AQ8IWF6 608 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 REXO1L1PQ8IX06 675 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 ZADH2Q8N4Q0 377 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 PPP4R1Q8TF05 950 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-206ENST00000542310 MS4A14Q96JA4 679 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 C10orf90Q96M02 699 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 PSMG3-AS1Q96PY0 264 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 PKP4Q99569 1192 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 SOX17Q9H6I2 414 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-206ENST00000542310 GALPQ9UBC7 116 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 ZNF282Q9UDV7 671 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-206ENST00000542310 TSR3Q9UJK0 312 aaKnown RBP14.92□□□□□ -0.02
VPS33A-206ENST00000542310 MED16Q9Y2X0 877 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 DHRS7Q9Y394 339 aa14.92□□□□□ -0.02
VPS33A-206ENST00000542310 LOC105369274A0A096LPK9 316 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 IGKV1-8A0A0C4DH67 115 aa14.91□□□□□ -0.02
VPS33A-206ENST00000542310 LOC102723532A0A0G2JNH3 316 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms