RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ZDHHC18Q9NUE0 388 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 WHRNQ9P202 907 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 AP1M2Q9Y6Q5 423 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 ATRQ13535 2644 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 H7C1Q1 480 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 ASNA1O43681 348 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 PMPCBO75439 489 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 TSPAN12O95859 305 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 GAS8O95995 478 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 CALB1P05937 261 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 POLBP06746 335 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 NUDT17P0C025 328 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 ITGAMP11215 1152 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 SSR1P43307 286 aaKnown RBP9.32□□□□□ -0.92
CHFR-220ENST00000541817 RPL21P46778 160 aaKnown RBP9.32□□□□□ -0.92
CHFR-220ENST00000541817 OR1D4P47884 311 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 EEF1A2Q05639 463 aaKnown RBP9.32□□□□□ -0.92
CHFR-220ENST00000541817 NIPAL4Q0D2K0 466 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 KRTCAP3Q53RY4 240 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 ZDHHC24Q6UX98 284 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 PHF13Q86YI8 300 aaPredicted RBP9.32□□□□□ -0.92
CHFR-220ENST00000541817 CCDC50Q8IVM0 306 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 LILRA3Q8N6C8 439 aaPredicted RBP9.32□□□□□ -0.92
CHFR-220ENST00000541817 C3orf20Q8ND61 904 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 LCN9Q8WX39 176 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 SLCO2A1Q92959 643 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 MBD6Q96DN6 1003 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 ZSCAN5AQ9BUG6 496 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 RASSF4Q9H2L5 321 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 SRMSQ9H3Y6 488 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 BPIFA1Q9NP55 256 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 IP6K2Q9UHH9 426 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 MAU2Q9Y6X3 613 aa9.32□□□□□ -0.92
CHFR-220ENST00000541817 MXRA5Q9NR99 2828 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 A0A087WUV0 522 aaPredicted RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 NSG1A0A0A6YYJ2 146 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 OR5H15A6NDH6 313 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 SIGLEC16A6NMB1 481 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 PRRG2O14669 202 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 RGS16O15492 202 aaPredicted RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 KLK8O60259 260 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 WFS1O76024 890 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 USP1O94782 785 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ATE1O95260 518 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ACPPP15309 386 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 HTR7P34969 479 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 NSG1P42857 185 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 AIF1P55008 147 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 CORO7P57737 925 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 NKX6-1P78426 367 aaPredicted RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 GUCY1A3Q02108 690 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 DPYSQ14117 519 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ATP13A5Q4VNC0 1218 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 RALGPS1Q5JS13 557 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ERMARDQ5T6L9 678 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 FCRLBQ6BAA4 426 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 TTC27Q6P3X3 843 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 C16orf47Q6ZP98 133 aaPredicted RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 ARHGEF18Q6ZSZ5 1173 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 TRMT10CQ7L0Y3 403 aaKnown RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 MON1BQ7L1V2 547 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 DET1Q7L5Y6 550 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ATPAF2Q8N5M1 289 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 C19orf47Q8N9M1 422 aaKnown RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 PHC3Q8NDX5 983 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ARMC2Q8NEN0 867 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 FBXO25Q8TCJ0 367 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 NSMCE1Q8WV22 266 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 HDAC10Q969S8 669 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 SNF8Q96H20 258 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 RMDN2Q96LZ7 410 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 TTC25Q96NG3 672 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 SIGLEC12Q96PQ1 595 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 FERD3LQ96RJ6 166 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 LYSMD1Q96S90 227 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 CNPY3Q9BT09 278 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 CRB3Q9BUF7 120 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 TMEM109Q9BVC6 243 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 PITPNM3Q9BZ71 974 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ROPN1BQ9BZX4 212 aaPredicted RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 RNF32Q9H0A6 362 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ROPN1Q9HAT0 212 aaPredicted RBP9.31□□□□□ -0.92
CHFR-220ENST00000541817 RASSF1Q9NS23 344 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 PARVAQ9NVD7 372 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ANKRD10Q9NXR5 420 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 GRHL1Q9NZI5 618 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ASIC3Q9UHC3 531 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 DNPEPQ9ULA0 475 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 L3MBTL1Q9Y468 752 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 ASB1Q9Y576 335 aa9.31□□□□□ -0.92
CHFR-220ENST00000541817 TLDC2A0PJX2 215 aa9.3□□□□□ -0.92
CHFR-220ENST00000541817 RGSL1A5PLK6 1076 aa9.3□□□□□ -0.92
CHFR-220ENST00000541817 GMNCA6NCL1 334 aa9.3□□□□□ -0.92
CHFR-220ENST00000541817 FAM171A2A8MVW0 826 aa9.3□□□□□ -0.92
CHFR-220ENST00000541817 ANKRD66B4E2M5 251 aa9.3□□□□□ -0.92
CHFR-220ENST00000541817 E7EVH7 732 aa9.3□□□□□ -0.92
CHFR-220ENST00000541817 NDC80O14777 642 aa9.3□□□□□ -0.92
CHFR-220ENST00000541817 UGT1A9O60656 530 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms