RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ZNF470Q6ECI4 717 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 CCDC137Q6PK04 289 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 SUSD1Q6UWL2 747 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 KIRREL2Q6UWL6 708 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 SHISA6Q6ZSJ9 500 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 COX15Q7KZN9 410 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 DENND6AQ8IWF6 608 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 REXO1L1PQ8IX06 675 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 ZADH2Q8N4Q0 377 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 DTWD1Q8N5C7 304 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 TM9SF4Q92544 642 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 ZNF669Q96BR6 464 aaPredicted RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 SNRNP40Q96DI7 357 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 C19orf60Q96EN9 201 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 SERPINB12Q96P63 405 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 NAP1L3Q99457 506 aaPredicted RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 SLC30A3Q99726 388 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 ZFYVE21Q9BQ24 234 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 CCDC68Q9H2F9 335 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 SOX17Q9H6I2 414 aaPredicted RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 ZBTB20Q9HC78 741 aaPredicted RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 XAB2Q9HCS7 855 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 ZNF304Q9HCX3 659 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 SLC6A20Q9NP91 592 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 MRPS30Q9NP92 439 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 FAM114A2Q9NRY5 505 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 STOX2Q9P2F5 926 aaPredicted RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 CTSFQ9UBX1 484 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 NXT1Q9UKK6 140 aaKnown RBP8.52□□□□□ -1.05
COPB1-211ENST00000534234 B3GNT3Q9Y2A9 372 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 FAM169AQ9Y6X4 670 aa8.52□□□□□ -1.05
COPB1-211ENST00000534234 RELNP78509 3460 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 ZCWPW2A0A1B0GU75 182 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 VSTM2BA6NLU5 285 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 MYO1CO00159 1063 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 SOCS6O14544 535 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 KIF5CO60282 957 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 MED26O95402 600 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 F7P08709 466 aaPredicted RBP8.51□□□□□ -1.05
COPB1-211ENST00000534234 ERVK-10P10266 1014 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 ERGP11308 486 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 RPA3P35244 121 aaPredicted RBP8.51□□□□□ -1.05
COPB1-211ENST00000534234 HSD17B2P37059 387 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 OCA2Q04671 838 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 PRDX1Q06830 199 aaKnown RBP8.51□□□□□ -1.05
COPB1-211ENST00000534234 ARHGAP19Q14CB8 494 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 NAA25Q14CX7 972 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 CYP1B1Q16678 543 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 MUM1Q2TAK8 710 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 TTLL9Q3SXZ7 439 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 PRAMEF13Q5VWM6 474 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 PRMT9Q6P2P2 845 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 NEK10Q6ZWH5 1172 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 RNF44Q7L0R7 432 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 PARP9Q8IXQ6 854 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 IQCKQ8N0W5 287 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 CISD2Q8N5K1 135 aaKnown RBP8.51□□□□□ -1.05
COPB1-211ENST00000534234 STT3BQ8TCJ2 826 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 VPS50Q96JG6 964 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 SIGLEC10Q96LC7 697 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 PKP4Q99569 1192 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 PLCD4Q9BRC7 762 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 SLC29A3Q9BZD2 475 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 FBXO6Q9NRD1 293 aaPredicted RBP8.51□□□□□ -1.05
COPB1-211ENST00000534234 SEMA3GQ9NS98 782 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 C20orf96Q9NUD7 363 aaPredicted RBP8.51□□□□□ -1.05
COPB1-211ENST00000534234 ASF1BQ9NVP2 202 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 KLHL42Q9P2K6 505 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 TAC3Q9UHF0 121 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 FBXL4Q9UKA2 621 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 NEU2Q9Y3R4 380 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 HS3ST3B1Q9Y662 390 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 MAD1L1Q9Y6D9 718 aa8.51□□□□□ -1.05
COPB1-211ENST00000534234 NBASA2RRP1 2371 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 ZNF839A8K0R7 811 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 E7ENX8 843 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 H0YGG7 62 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 GFYI3L273 518 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 PGRMC1O00264 195 aaKnown RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 ZBTB14O43829 449 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 ALOX12BO75342 701 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 VPS26AO75436 327 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 HAUS5O94927 633 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 SLC16A8O95907 504 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 SYF2O95926 243 aaKnown RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 ZGLP1P0C6A0 271 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 GLRBP48167 497 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 PNLIPRP1P54315 467 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 ARF3P61204 181 aaPredicted RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 TAP2Q03519 686 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 KLC1Q07866 573 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 MRPL49Q13405 166 aaKnown RBP8.5□□□□□ -1.05
COPB1-211ENST00000534234 CUL1Q13616 776 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 RBBP7Q16576 425 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 LONRF1Q17RB8 773 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 PRTGQ2VWP7 1150 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 AGAP7PQ5VUJ5 663 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 IRAK1BP1Q5VVH5 260 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 ZNF549Q6P9A3 640 aa8.5□□□□□ -1.05
COPB1-211ENST00000534234 CYHR1Q6ZMK1 362 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms