RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PSMG3-AS1Q96PY0 264 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 NAP1L3Q99457 506 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 SLC30A3Q99726 388 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 ILKAPQ9H0C8 392 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 CCDC68Q9H2F9 335 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 FAM114A2Q9NRY5 505 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 SEMA3GQ9NS98 782 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 UTP6Q9NYH9 597 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
CTDSP1-208ENST00000482272 PCM1Q15154 2024 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 A0A1W2PPV9 198 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 TCP11X1B4DZS4 312 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 PHF2O75151 1096 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 PSIP1O75475 530 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ERVK-10P10266 1014 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 RPA3P35244 121 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 FASTKQ14296 549 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ARHGAP19Q14CB8 494 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 RBBP7Q16576 425 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 MUM1Q2TAK8 710 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ACSBG2Q5FVE4 666 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 PRAMEF13Q5VWM6 474 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 FRMPD2BQ6IN97 320 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 NEK10Q6ZWH5 1172 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 LMNTD2Q8IXW0 634 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 RASGEF1CQ8N431 466 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 MCUQ8NE86 351 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ZNF669Q96BR6 464 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 SNRNP40Q96DI7 357 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 SPSB2Q99619 263 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ZFYVE21Q9BQ24 234 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 DPH7Q9BTV6 452 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ACAT2Q9BWD1 397 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 SOX17Q9H6I2 414 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 SLC6A20Q9NP91 592 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 MRPS30Q9NP92 439 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 ZNF282Q9UDV7 671 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 CDC14AQ9UNH5 594 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 MED16Q9Y2X0 877 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 MAU2Q9Y6X3 613 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 SEC16AO15027 2179 aa12.85□□□□□ -0.35
CTDSP1-208ENST00000482272 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 LOC102723532A0A0G2JNH3 316 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 OR2A25A4D2G3 310 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 VSTM2BA6NLU5 285 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 MYO1CO00159 1063 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 SOCS6O14544 535 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 ZBTB14O43829 449 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 VPS26AO75436 327 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 USP1O94782 785 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 CCNDBP1O95273 360 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 COILP38432 576 aaPredicted RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 GLRBP48167 497 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 CARSP49589 748 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 EMP3P54852 163 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 PRDX1Q06830 199 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 TSTA3Q13630 321 aaPredicted RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 EIF2S3LQ2VIR3 472 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 TUBB8Q3ZCM7 444 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 PRR30Q53SZ7 412 aaPredicted RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 AGAP7PQ5VUJ5 663 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 ZNF470Q6ECI4 717 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 CCDC137Q6PK04 289 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 SUSD1Q6UWL2 747 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 SHISA6Q6ZSJ9 500 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 RNF44Q7L0R7 432 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 REXO1L1PQ8IX06 675 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 PARP9Q8IXQ6 854 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 OR4N4Q8N0Y3 316 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 CISD2Q8N5K1 135 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 GIMAP7Q8NHV1 300 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 CALML6Q8TD86 181 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 MIEF2Q96C03 454 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 AGAP4Q96P64 663 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 PKP4Q99569 1192 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 MESP1Q9BRJ9 268 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 CUEDC1Q9NWM3 386 aaPredicted RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 KLHL42Q9P2K6 505 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 FBXL4Q9UKA2 621 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 COPG1Q9Y678 874 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 COMMD10Q9Y6G5 202 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 HECTD1Q9ULT8 2610 aa12.84□□□□□ -0.35
CTDSP1-208ENST00000482272 ARHGEF33A8MVX0 844 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 H0YGG7 62 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 GOLGA8MH3BSY2 632 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 TXNDC9O14530 226 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 PRPF4O43172 522 aaKnown RBP eCLIP12.83□□□□□ -0.361e-6■■□□□ 13.9
CTDSP1-208ENST00000482272 MPC1LP0DKB6 136 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 ERGP11308 486 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 CLCN7P51798 805 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 PNLIPRP1P54315 467 aa12.83□□□□□ -0.36
CTDSP1-208ENST00000482272 ARF3P61204 181 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms