RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 H0Y858 1186 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 PSMD11O00231 422 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 PLOD2O00469 737 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 MID1O15344 667 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 CLIC3O95833 236 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 FAM58BPP0C7Q3 252 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 FCARP24071 287 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 RPL10P27635 214 aaKnown RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 GDI1P31150 447 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 HSPA13P48723 471 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 TBPL1P62380 186 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 MYBPC1Q00872 1141 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 PPP1R8Q12972 351 aaKnown RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 PNPT1Q8TCS8 783 aaKnown RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 MAGEE2Q8TD90 523 aaPredicted RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 FAM162AQ96A26 154 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 CENPNQ96H22 339 aaPredicted RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 ZNF597Q96LX8 424 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 LGR4Q9BXB1 951 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 TRIM39Q9HCM9 518 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 ADGRE2Q9UHX3 823 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 MAGEL2Q9UJ55 1249 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 SH2B3Q9UQQ2 575 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 ASF1AQ9Y294 204 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 KCNE2Q9Y6J6 123 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 TRPM6Q9BX84 2022 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 C1QTNF3-AMACRE9PGA6 284 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 RFXANKO14593 260 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 EI24O14681 340 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 NPC1O15118 1278 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 CPSF4O95639 269 aaKnown RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 PRPS2P11908 318 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 LIPJQ5W064 366 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 TMEM214Q6NUQ4 689 aaKnown RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 ENPP6Q6UWR7 440 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 HEATR4Q86WZ0 1026 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 PROSER1Q86XN7 944 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 CPA6Q8N4T0 437 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 ANKFN1Q8N957 763 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 GANCQ8TET4 914 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 CYGBQ8WWM9 190 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 FAM120BQ96EK7 910 aaKnown RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 SOX17Q9H6I2 414 aaPredicted RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 GDE1Q9NZC3 331 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 NFKBIL1Q9UBC1 381 aaPredicted RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 HCN2Q9UL51 889 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 PLXNA2O75051 1894 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 GNG14A0A1W2PPG7 69 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 SCAMP1O15126 338 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 ANXA6P08133 673 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 GNAO1P09471 354 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 COX7A2P14406 83 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 LRRK1Q38SD2 2015 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 TTC23LQ6PF05 361 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 PARM1Q6UWI2 310 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 FAM83HQ6ZRV2 1179 aaPredicted RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 ZNF621Q6ZSS3 439 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 DSG4Q86SJ6 1040 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 SATL1Q86VE3 508 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 C1orf52Q8N6N3 182 aaKnown RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 OR8J3Q8NGG0 315 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 HUS1BQ8NHY5 278 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 FGF14Q92915 247 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 REXO4Q9GZR2 422 aaKnown RBP11.4□□□□□ -0.58
VTA1-203ENST00000452973 CAAP1Q9H8G2 361 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 UTS2RQ9UKP6 389 aa11.4□□□□□ -0.58
VTA1-203ENST00000452973 ELOVL7A1L3X0 281 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 LDLRP01130 860 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 CAPNS1P04632 268 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 MAPK1P28482 360 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 TIE1P35590 1138 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 KIR3DL1P43629 444 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 CCT8P50990 548 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 TCEA2Q15560 299 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 SMU1Q2TAY7 513 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 PPP4R4Q6NUP7 873 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 NLRP8Q86W28 1048 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 OR7G3Q8NG95 312 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 PANX1Q96RD7 426 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 MUC13Q9H3R2 512 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 RMND5AQ9H871 391 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 SLC28A3Q9HAS3 691 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 SERGEFQ9UGK8 458 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 CNOT11Q9UKZ1 510 aaKnown RBP11.4□□□□□ -0.59
VTA1-203ENST00000452973 OR1A2Q9Y585 309 aa11.4□□□□□ -0.59
VTA1-203ENST00000452973 MAGED1Q9Y5V3 778 aaPredicted RBP11.4□□□□□ -0.59
VTA1-203ENST00000452973 AXIN1O15169 862 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 LATO43561 262 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 TGFB1P01137 390 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 GGT1P19440 569 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 MAGEA10P43363 369 aaPredicted RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 RPS13P62277 151 aaKnown RBP11.39□□□□□ -0.59
VTA1-203ENST00000452973 LAPTM5Q13571 262 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 KCNC3Q14003 757 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 HKDC1Q2TB90 917 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 C2orf27AQ580R0 203 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 RUNDC3AQ59EK9 446 aa11.39□□□□□ -0.59
VTA1-203ENST00000452973 IER5LQ5T953 404 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms