RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PALM2Q8IXS6 379 aa29.47■■■□□ 2.31
CMTM4-202ENST00000394106 DLG3Q92796 817 aa29.47■■■□□ 2.31
CMTM4-202ENST00000394106 NDOR1Q9UHB4 597 aa29.47■■■□□ 2.31
CMTM4-202ENST00000394106 TUBD1Q9UJT1 453 aa29.47■■■□□ 2.31
CMTM4-202ENST00000394106 CORO1CQ9ULV4 474 aaPredicted RBP29.47■■■□□ 2.31
CMTM4-202ENST00000394106 UTP11Q9Y3A2 253 aaKnown RBP29.47■■■□□ 2.31
CMTM4-202ENST00000394106 FER1L5A0AVI2 2057 aa29.47■■■□□ 2.31
CMTM4-202ENST00000394106 E7ENX8 843 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 TAP2Q03519 686 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 NAA25Q14CX7 972 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 TCTE1Q5JU00 501 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 FRMPD2BQ6IN97 320 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 TTLL10Q6ZVT0 673 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 TTC29Q8NA56 475 aaPredicted RBP29.46■■■□□ 2.31
CMTM4-202ENST00000394106 C17orf62Q9BQA9 187 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 SAYSD1Q9NPB0 183 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 GRHL1Q9NZI5 618 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 IFT80Q9P2H3 777 aaPredicted RBP29.46■■■□□ 2.31
CMTM4-202ENST00000394106 VWA7Q9Y334 891 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 PSAT1Q9Y617 370 aa29.46■■■□□ 2.31
CMTM4-202ENST00000394106 CCNDBP1O95273 360 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 C8GP07360 202 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 ARSFP54793 590 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 GRM7Q14831 915 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 THEMIS2Q5TEJ8 643 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 ICE2Q659A1 982 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 FAM45BPQ6NSW5 357 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 STRA8Q7Z7C7 330 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 C9orf43Q8TAL5 461 aaPredicted RBP29.45■■■□□ 2.31
CMTM4-202ENST00000394106 FAM45AQ8TCE6 357 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 MCOLN3Q8TDD5 553 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 PYROXD1Q8WU10 500 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 THAP4Q8WY91 577 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 OLFM1Q99784 485 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 MOCS1Q9NZB8 636 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 PADI2Q9Y2J8 665 aa29.45■■■□□ 2.31
CMTM4-202ENST00000394106 OR2A25A4D2G3 310 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 SAT1P21673 171 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 FDXRP22570 491 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 IMPA1P29218 277 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 IL2P60568 153 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 NKAIN1Q4KMZ8 207 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 WASHC2DQ5SRD0 308 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 RNF44Q7L0R7 432 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 ABHD17AQ96GS6 310 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 DHRS4Q9BTZ2 278 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 RAB17Q9H0T7 212 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 ZNF71Q9NQZ8 489 aaPredicted RBP29.44■■■□□ 2.3
CMTM4-202ENST00000394106 CUTCQ9NTM9 273 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 PDE10AQ9Y233 779 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 HEMK1Q9Y5R4 338 aaPredicted RBP29.44■■■□□ 2.3
CMTM4-202ENST00000394106 SEC16AO15027 2179 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 CFAP46Q8IYW2 2715 aa29.44■■■□□ 2.3
CMTM4-202ENST00000394106 FASNP49327 2511 aaKnown RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 LOC105369274A0A096LPK9 316 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 LOC102723532A0A0G2JNH3 316 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 SRPX2O60687 465 aaPredicted RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 EIF2S1P05198 315 aaKnown RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 GCGRP47871 477 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 PMS2P54278 862 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 PRDX1Q06830 199 aaKnown RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 CKAP4Q07065 602 aaKnown RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 CBLBQ13191 982 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 SP140Q13342 867 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 ZNF572Q7Z3I7 529 aaPredicted RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 LRRC56Q8IYG6 542 aaPredicted RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 OR4N4Q8N0Y3 316 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 ZNF285Q96NJ3 590 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 ZFYVE21Q9BQ24 234 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 PLCD4Q9BRC7 762 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 PARVBQ9HBI1 364 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 STOX2Q9P2F5 926 aaPredicted RBP29.43■■■□□ 2.3
CMTM4-202ENST00000394106 ANKMY1Q9P2S6 941 aa29.43■■■□□ 2.3
CMTM4-202ENST00000394106 IGKV1-8A0A0C4DH67 115 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 A0A1B0GX78 115 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 ARGFXA6NJG6 315 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 RFPL1O75677 317 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 URI1O94763 535 aaPredicted RBP29.42■■■□□ 2.3
CMTM4-202ENST00000394106 PLTPP55058 493 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 FBXO42Q6P3S6 717 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 MBOAT1Q6ZNC8 495 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 PRICKLE2Q7Z3G6 844 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 PAQR7Q86WK9 346 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 ADAMTS17Q8TE56 1095 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 CCDC138Q96M89 665 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 CDC23Q9UJX2 597 aa29.42■■■□□ 2.3
CMTM4-202ENST00000394106 PTRH2Q9Y3E5 179 aaKnown RBP29.42■■■□□ 2.3
CMTM4-202ENST00000394106 DSCR3O14972 297 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 EIF3HO15372 352 aaKnown RBP eCLIP29.41■■■□□ 2.3
CMTM4-202ENST00000394106 SLC16A5O15375 505 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 PIAS1O75925 651 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 DNAJB5O75953 348 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 TSPAN12O95859 305 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 PLA2G2AP14555 144 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 SSTR1P30872 391 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 CHAF1BQ13112 559 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 YOD1Q5VVQ6 348 aaPredicted RBP29.41■■■□□ 2.3
CMTM4-202ENST00000394106 CPZQ66K79 652 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 ADCK2Q7Z695 626 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 SLC26A11Q86WA9 606 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms