RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ALG2Q9H553 416 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 SLC6A13Q9NSD5 602 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 C1orf109Q9NX04 203 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 ABCD2Q9UBJ2 740 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 MSRAQ9UJ68 235 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 STON1Q9Y6Q2 735 aa13.18□□□□□ -0.3
VMP1-201ENST00000262291 GOLGA4Q13439 2230 aaKnown RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 A0A1W2PP55 124 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 ARPC2O15144 300 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 POP7O75817 140 aaKnown RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 C1QCP02747 245 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 ENO2P09104 434 aaPredicted RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 MEF2AQ02078 507 aaPredicted RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 DLEU7Q6UYE1 221 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 TRIM46Q7Z4K8 759 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 AURKBQ96GD4 344 aaPredicted RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 VAPAQ9P0L0 249 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 C6orf203Q9P0P8 240 aaPredicted RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 BCAP29Q9UHQ4 241 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 COL4A3Q01955 1670 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 ARHGAP10A1A4S6 786 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 KPNA5O15131 536 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 LATO43561 262 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 C8BP07358 591 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 IMPA1P29218 277 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 ELP6Q0PNE2 266 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 DOC2AQ14183 400 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 EIF4HQ15056 248 aaKnown RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 PGS1Q32NB8 556 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 HMBOX1Q6NT76 420 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 ZFP1Q6P2D0 407 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 SYTL1Q8IYJ3 562 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 OR2T34Q8NGX1 318 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 OR2T3Q8NH03 318 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 GANCQ8TET4 914 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 C17orf50Q8WW18 174 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 PPP1R16AQ96I34 528 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 CCT7Q99832 543 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 IKZF5Q9H5V7 419 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 RAD18Q9NS91 495 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 THAP10Q9P2Z0 257 aaPredicted RBP13.17□□□□□ -0.3
VMP1-201ENST00000262291 OR1A2Q9Y585 309 aa13.17□□□□□ -0.3
VMP1-201ENST00000262291 CASQ2O14958 399 aaPredicted RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 LILRB5O75023 590 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 PSIP1O75475 530 aaKnown RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 PCNAP12004 261 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 DRD3P35462 400 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 PHC1P78364 1004 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 C6orf52Q5T4I8 152 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 PIP5KL1Q5T9C9 394 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 CACHD1Q5VU97 1274 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 ANKRD26P1Q6NSI1 321 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 KIAA1211LQ6NV74 962 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 HEATR4Q86WZ0 1026 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 NRSN1Q8IZ57 195 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 FBXL8Q96CD0 374 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 CIB1Q99828 191 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 TBCDQ9BTW9 1192 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 MRPL40Q9NQ50 206 aaKnown RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 SLC23A2Q9UGH3 650 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 FADS3Q9Y5Q0 445 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 TCRBV3S1A0A5B6 114 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 KANSL1LA0AUZ9 987 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 SAC3D1A6NKF1 404 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 NPC1O15118 1278 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 SERPINB7O75635 380 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 CATP04040 527 aaKnown RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 CKMT2P17540 419 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 HNMTP50135 292 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 TAS2R38P59533 333 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 CDKL1Q00532 357 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 FCHO2Q0JRZ9 810 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 TRAP1Q12931 704 aaKnown RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 SP140Q13342 867 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 KIAA0040Q15053 153 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 USP39Q53GS9 565 aaKnown RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 FRG2Q64ET8 278 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 XKR5Q6UX68 686 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 FRG2BQ96QU4 278 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 ZBTB18Q99592 522 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 OSBPL6Q9BZF3 934 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 MBNL1Q9NR56 388 aaKnown RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.16□□□□□ -0.3
VMP1-201ENST00000262291 SNX6Q9UNH7 406 aa13.16□□□□□ -0.3
VMP1-201ENST00000262291 C1QTNF3-AMACRE9PGA6 284 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 EIF3FO00303 357 aaPredicted RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 PEX1O43933 1283 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 GSTT2P0CG29 244 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 GSTT2BP0CG30 244 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 RPL10P27635 214 aaKnown RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 AP1S2P56377 157 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 RELAQ04206 551 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 CATSPEREQ5SY80 951 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms