RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CLLU1OSQ5K130 101 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 SERPINA11Q86U17 422 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 CLDN19Q8N6F1 224 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 AMER2Q8N7J2 671 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 BEND7Q8N7W2 519 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 SLC38A4Q969I6 547 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 TESCQ96BS2 214 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 BOCQ9BWV1 1114 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 SLC32A1Q9H598 525 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 KCTD5Q9NXV2 234 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 AFF4Q9UHB7 1163 aaKnown RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 PNMA8BQ9ULN7 279 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 ABCG2Q9UNQ0 655 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 HIST1H2AGP0C0S8 130 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 IRF1P10914 325 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 HIST1H2ADP20671 130 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 FSHRP23945 695 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 MASP1P48740 699 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 GZMMP51124 257 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 AP1S1P61966 158 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 ELP6Q0PNE2 266 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 KRR1Q13601 381 aaKnown RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 PROX2Q3B8N5 592 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 CEP68Q76N32 757 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 LACC1Q8IV20 430 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 C2orf15Q8WU43 125 aaKnown RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 SKA2Q8WVK7 121 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 MYDGFQ969H8 173 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 CMTM7Q96FZ5 175 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 HIST1H2AHQ96KK5 128 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 PANX1Q96RD7 426 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 HIST1H2AJQ99878 128 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 H2AFJQ9BTM1 129 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 ACPTQ9BZG2 426 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 SP140LQ9H930 580 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 DLGAP4Q9Y2H0 992 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 SCN10AQ9Y5Y9 1956 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 AIREO43918 545 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 LRATO95237 230 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 DLGAP3O95886 979 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 PDYNP01213 254 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ALPIP09923 528 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 NFATC2Q13469 925 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 TAF12Q16514 161 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 DUOXA1Q1HG43 343 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 VMACQ2NL98 169 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ZNF404Q494X3 552 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 RNF19BQ6ZMZ0 732 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 RASAL3Q86YV0 1011 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 PLPP6Q8IY26 295 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 TCAIMQ8N3R3 496 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 LKAAEAR1Q8TD35 194 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 SERHLQ9NQF3 203 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 SLC6A13Q9NSD5 602 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 NDRG4Q9ULP0 352 aaKnown RBP10.47□□□□□ -0.73
CCDC40-207ENST00000572253 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 TTC34A8MYJ7 566 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 TAF4O00268 1085 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 CLIC1O00299 241 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 FPGTO14772 594 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ALDH7A1P49419 539 aaKnown RBP10.47□□□□□ -0.73
CCDC40-207ENST00000572253 TPTEP56180 551 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ARF5P84085 180 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 IFITM3Q01628 133 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ADGRF1Q5T601 910 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 OR4F3Q6IEY1 312 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ZNF621Q6ZSS3 439 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 LRRC70Q7Z2Q7 622 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 CYP2U1Q7Z449 544 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 POC5Q8NA72 575 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 CSGALNACT1Q8TDX6 532 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 HTATIP2Q9BUP3 242 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 C6orf62Q9GZU0 229 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-207ENST00000572253 AASSQ9UDR5 926 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ASGR1P07306 291 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 CBSLP0DN79 551 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 KDELR2P33947 212 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 CBSP35520 551 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 KRT20P35900 424 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 PHC1P78364 1004 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 SRSF11Q05519 484 aaKnown RBP10.47□□□□□ -0.73
CCDC40-207ENST00000572253 CD300CQ08708 224 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ELAVL2Q12926 359 aaKnown RBP10.47□□□□□ -0.73
CCDC40-207ENST00000572253 MRPL58Q14197 206 aaKnown RBP10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ZNF181Q2M3W8 571 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 INAVAQ3KP66 663 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 GPR33Q49SQ1 333 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 CDKL4Q5MAI5 379 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 AKAP14Q86UN6 197 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 TRPV1Q8NER1 839 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 KBTBD8Q8NFY9 601 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 ERLEC1Q96DZ1 483 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 HSH2DQ96JZ2 352 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 APOLD1Q96LR9 279 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 COPS4Q9BT78 406 aa10.47□□□□□ -0.73
CCDC40-207ENST00000572253 UPK1BO75841 260 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 DIRAS1O95057 198 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 PGLSO95336 258 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 C9P02748 559 aa10.46□□□□□ -0.73
CCDC40-207ENST00000572253 ENGP17813 658 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms