RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MID1IP1Q9NPA3 183 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 LNPEPQ9UIQ6 1025 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 PDE10AQ9Y233 779 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 PRAMEF33A0A0G2JMD5 474 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 AZIN1O14977 448 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 HNRNPCL1O60812 293 aaKnown RBP16.04■□□□□ 0.16
TPM1-219ENST00000559397 C1orf105O95561 183 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 SLC2A4P14672 509 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 EPHA3P29320 983 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 MAPK9P45984 424 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 SUZ12Q15022 739 aaKnown RBP16.04■□□□□ 0.16
TPM1-219ENST00000559397 AASDHQ4L235 1098 aaPredicted RBP16.04■□□□□ 0.16
TPM1-219ENST00000559397 KANK2Q63ZY3 851 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 TTC23LQ6PF05 361 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 UBE2R2Q712K3 238 aaPredicted RBP16.04■□□□□ 0.16
TPM1-219ENST00000559397 PHC3Q8NDX5 983 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 CFAP61Q8NHU2 1237 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 ACTRT2Q8TDY3 377 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 ESAMQ96AP7 390 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 SLC7A6OSQ96CW6 309 aaPredicted RBP16.04■□□□□ 0.16
TPM1-219ENST00000559397 FOPNLQ96NB1 174 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 ZNF382Q96SR6 550 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 SEMA4BQ9NPR2 832 aaPredicted RBP16.04■□□□□ 0.16
TPM1-219ENST00000559397 IMP3Q9NV31 184 aaKnown RBP16.04■□□□□ 0.16
TPM1-219ENST00000559397 ZNF225Q9UK10 706 aa16.04■□□□□ 0.16
TPM1-219ENST00000559397 EP300Q09472 2414 aaPredicted RBP16.03■□□□□ 0.16
TPM1-219ENST00000559397 GOLGA8QA0A0J9YX86 632 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 A0A1B0GTL3 188 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 GOLGA8OA6NCC3 632 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 GOLGA8NF8WBI6 632 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ESRRBO95718 433 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 GUCA1CO95843 209 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ALPPL2P10696 532 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 GGT5P36269 586 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 PKNOX1P55347 436 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 MAZP56270 477 aaKnown RBP16.03■□□□□ 0.16
TPM1-219ENST00000559397 SLC14A1Q13336 389 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 UBAP2LQ14157 1087 aaKnown RBP16.03■□□□□ 0.16
TPM1-219ENST00000559397 C18orf21Q32NC0 220 aaPredicted RBP16.03■□□□□ 0.16
TPM1-219ENST00000559397 CLEC6AQ6EIG7 209 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ZCCHC8Q6NZY4 707 aaKnown RBP16.03■□□□□ 0.16
TPM1-219ENST00000559397 SYVN1Q86TM6 617 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 SLC35F3Q8IY50 421 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ARL14Q8N4G2 192 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 EID2Q8N6I1 236 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ARL10Q8N8L6 244 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 FAM181AQ8N9Y4 354 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 KYQ8NBH2 561 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 OR5AR1Q8NGP9 310 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 OR5K2Q8NHB8 316 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 TMEM79Q9BSE2 394 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 CD244Q9BZW8 370 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ZNF385DQ9H6B1 395 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 CPNE7Q9UBL6 633 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 TRIM33Q9UPN9 1127 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ASF1AQ9Y294 204 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 BTBD3Q9Y2F9 522 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 HEBP2Q9Y5Z4 205 aa16.03■□□□□ 0.16
TPM1-219ENST00000559397 ARHGEF33A8MVX0 844 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 SIGLEC6O43699 453 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 GDF9O60383 454 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 ANXA5P08758 320 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 CD59P13987 128 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 FASLGP48023 281 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 RPIAP49247 311 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 FOXA1P55317 472 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 C14orf28Q4W4Y0 310 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.02■□□□□ 0.16
TPM1-219ENST00000559397 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.02■□□□□ 0.16
TPM1-219ENST00000559397 GOLGA7Q7Z5G4 137 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 TBC1D21Q8IYX1 336 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 CPSF7Q8N684 471 aaKnown RBP16.02■□□□□ 0.16
TPM1-219ENST00000559397 CEP70Q8NHQ1 597 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 FERD3LQ96RJ6 166 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 EGFL8Q99944 293 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 TRIM54Q9BYV2 358 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 LRMDAQ9H2I8 198 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 MVB12BQ9H7P6 319 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 SLC40A1Q9NP59 571 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 POT1Q9NUX5 634 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 DNAJC15Q9Y5T4 150 aa16.02■□□□□ 0.16
TPM1-219ENST00000559397 ZFHX2Q9C0A1 2572 aaPredicted RBP16.02■□□□□ 0.16
TPM1-219ENST00000559397 ASCC3Q8N3C0 2202 aaKnown RBP16.02■□□□□ 0.15
TPM1-219ENST00000559397 LY6G6EA0A0G2JKS1 128 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 CFAP73A6NFT4 308 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 C4orf47A7E2U8 309 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 E9PBE3 544 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 KLHL41O60662 606 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 SKAP2O75563 359 aaPredicted RBP16.02■□□□□ 0.15
TPM1-219ENST00000559397 CATP04040 527 aaKnown RBP16.02■□□□□ 0.15
TPM1-219ENST00000559397 CALB2P22676 271 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 PRDX3P30048 256 aaKnown RBP16.02■□□□□ 0.15
TPM1-219ENST00000559397 GRK6P43250 576 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 BDKRB1P46663 353 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 HSPA7P48741 367 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 AP1S2P56377 157 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 CDC16Q13042 620 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 GRB7Q14451 532 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 CCSMST1Q4G0I0 132 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 GPRIN3Q6ZVF9 776 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms