RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TSTA3Q13630 321 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-206ENST00000536398 PAQR3Q6TCH7 311 aa13.7□□□□□ -0.22
UBE3B-206ENST00000536398 RAB42Q8N4Z0 105 aa13.7□□□□□ -0.22
UBE3B-206ENST00000536398 FBXO36Q8NEA4 188 aa13.7□□□□□ -0.22
UBE3B-206ENST00000536398 ADAMTS6Q9UKP5 1117 aa13.7□□□□□ -0.22
UBE3B-206ENST00000536398 PSAT1Q9Y617 370 aa13.7□□□□□ -0.22
UBE3B-206ENST00000536398 COMMD10Q9Y6G5 202 aa13.7□□□□□ -0.22
UBE3B-206ENST00000536398 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
UBE3B-206ENST00000536398 LOC105369274A0A096LPK9 316 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 LOC102723532A0A0G2JNH3 316 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 B8ZZF3 427 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 E7ESA3 106 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 SMAPO00193 183 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 ZSCAN9O15535 394 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-206ENST00000536398 PIAS1O75925 651 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 SLC16A8O95907 504 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 SYF2O95926 243 aaKnown RBP13.69□□□□□ -0.22
UBE3B-206ENST00000536398 GCGRP47871 477 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 PNLIPRP1P54315 467 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 SLC9A5Q14940 896 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 TRADDQ15628 312 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 UGT8Q16880 541 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 FRMPD2BQ6IN97 320 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 FBXO42Q6P3S6 717 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 CAPN12Q6ZSI9 719 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 OR4N4Q8N0Y3 316 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 DTWD1Q8N5C7 304 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 ZNF480Q8WV37 535 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 APOBEC4Q8WW27 367 aaKnown RBP13.69□□□□□ -0.22
UBE3B-206ENST00000536398 ZUFSPQ96AP4 578 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 LRRC39Q96DD0 335 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 GBP5Q96PP8 586 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 ERP44Q9BS26 406 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 DPH7Q9BTV6 452 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 SYNPO2LQ9H987 977 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 SLC6A20Q9NP91 592 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 ZNF71Q9NQZ8 489 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-206ENST00000536398 FAM114A2Q9NRY5 505 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 ABCF3Q9NUQ8 709 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 STOX2Q9P2F5 926 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-206ENST00000536398 TRMT6Q9UJA5 497 aaKnown RBP13.69□□□□□ -0.22
UBE3B-206ENST00000536398 AP1M2Q9Y6Q5 423 aa13.69□□□□□ -0.22
UBE3B-206ENST00000536398 SEC16AO15027 2179 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 IGKV1-8A0A0C4DH67 115 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 A0A0J9YVX5 310 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 FAM187AA6NFU0 413 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TARM1B6A8C7 271 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 E7ENX8 843 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 PYCARD-AS1I3L0S3 204 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 K7EM74 188 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 ZBTB14O43829 449 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 CNOT3O75175 753 aaKnown RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 DNAJB5O75953 348 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 MED26O95402 600 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 HBQ1P09105 142 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 RAB40ALP0C0E4 278 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 ENO3P13929 434 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 ITGAXP20702 1163 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 AGXTP21549 392 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 VSX2P58304 361 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TAP2Q03519 686 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 CHAF1BQ13112 559 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 NCF4Q15080 339 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 HECTD2Q5U5R9 776 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 MLIPQ5VWP3 458 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 DUPD1Q68J44 220 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 RHBDD2Q6NTF9 364 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 KIAA0408Q6ZU52 694 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 UBE2R2Q712K3 238 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 ZNF605Q86T29 641 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 SYVN1Q86TM6 617 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 PTRH1Q86Y79 214 aaKnown RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 LRRC56Q8IYG6 542 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 ZBED8Q8IZ13 594 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 FBXO15Q8NCQ5 510 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 SMPDL3AQ92484 453 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 ABHD17AQ96GS6 310 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 OLFM1Q99784 485 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 SELENOSQ9BQE4 189 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TRIM55Q9BYV6 548 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 SLC25A18Q9H1K4 315 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 ADNPQ9H2P0 1102 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 SMYD2Q9NRG4 433 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 SLC22A11Q9NSA0 550 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 INTS7Q9NVH2 962 aaKnown RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TAS2R13Q9NYV9 303 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 MOCS1Q9NZB8 636 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 GRHL1Q9NZI5 618 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TAC3Q9UHF0 121 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TCFL5Q9UL49 500 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 POLHQ9Y253 713 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 KLK4Q9Y5K2 254 aa13.68□□□□□ -0.22
UBE3B-206ENST00000536398 FASNP49327 2511 aaKnown RBP13.68□□□□□ -0.22
UBE3B-206ENST00000536398 TSPAN12O95859 305 aa13.67□□□□□ -0.22
UBE3B-206ENST00000536398 RECKO95980 971 aa13.67□□□□□ -0.22
UBE3B-206ENST00000536398 PLA2G2AP14555 144 aa13.67□□□□□ -0.22
UBE3B-206ENST00000536398 NR1D1P20393 614 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms