RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HEATR4Q86WZ0 1026 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 MIER2Q8N344 545 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 KIAA1958Q8N8K9 716 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 ACVR1CQ8NER5 493 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 TMIEQ8NEW7 156 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 CADM4Q8NFZ8 388 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 C1orf216Q8TAB5 229 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF483Q8TF39 744 aaPredicted RBP4.64□□□□□ -1.67
EDEM3-203ENST00000439962 PYDC1Q8WXC3 89 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 DNASE2BQ8WZ79 361 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 KCNJ9Q92806 393 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 DGCR14Q96DF8 476 aaKnown RBP4.64□□□□□ -1.67
EDEM3-203ENST00000439962 CATSPER2Q96P56 530 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 ORAI3Q9BRQ5 295 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 SPATA16Q9BXB7 569 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 TMEM168Q9H0V1 697 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 SLC32A1Q9H598 525 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 CARS2Q9HA77 564 aaKnown RBP4.64□□□□□ -1.67
EDEM3-203ENST00000439962 PAPOLBQ9NRJ5 636 aaKnown RBP4.64□□□□□ -1.67
EDEM3-203ENST00000439962 LATS2Q9NRM7 1088 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 RIC8BQ9NVN3 520 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 ASIC5Q9NY37 505 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 PTTG2Q9NZH5 202 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 NUDT4Q9NZJ9 180 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 ACTR3BQ9P1U1 418 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 APOBEC3BQ9UH17 382 aaKnown RBP4.64□□□□□ -1.67
EDEM3-203ENST00000439962 CIDEBQ9UHD4 219 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 FZD4Q9ULV1 537 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 AP4S1Q9Y587 144 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 KCTD3Q9Y597 815 aa4.64□□□□□ -1.67
EDEM3-203ENST00000439962 CFAP20Q9Y6A4 193 aaKnown RBP4.64□□□□□ -1.67
EDEM3-203ENST00000439962 A0A1W2PQ67 120 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 TRIM64CA6NLI5 447 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 MRASO14807 208 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 AZIN1O14977 448 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 SIGLEC6O43699 453 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 VPS26AO75436 327 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CER1O95813 267 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 FTH1P19P0C7X4 201 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ACPPP15309 386 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 DGKAP23743 735 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PAX7P23759 505 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PEX2P28328 305 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 TTKP33981 857 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CCT8P50990 548 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 NR1H2P55055 460 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 MAD2L1Q13257 205 aaPredicted RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 APOFQ13790 326 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PCBP2Q15366 365 aaKnown RBP eCLIP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 SFT2D3Q587I9 215 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 XKR7Q5GH72 579 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ANKS6Q68DC2 871 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PPP4R4Q6NUP7 873 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 FAM151BQ6UXP7 276 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 LIPIQ6XZB0 460 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 USP53Q70EK8 1073 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PROSER1Q86XN7 944 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PHYKPLQ8IUZ5 450 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 SLC25A45Q8N413 288 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 DPP10Q8N608 796 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CCNYL1Q8N7R7 359 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 BHLHE22Q8NFJ8 381 aaPredicted RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 TNIP2Q8NFZ5 429 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ZFP28Q8NHY6 868 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CEP76Q8TAP6 659 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ADAMTS16Q8TE57 1224 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 UBTD2Q8WUN7 234 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 LPGAT1Q92604 370 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 HDAC10Q969S8 669 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 AP2M1Q96CW1 435 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ATXN7L3BQ96GX2 97 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CNDP2Q96KP4 475 aaKnown RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 RDH12Q96NR8 316 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF382Q96SR6 550 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 RIOK2Q9BVS4 552 aaKnown RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CEP44Q9C0F1 390 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CCDC68Q9H2F9 335 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 WDR55Q9H6Y2 383 aaPredicted RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 CCM2LQ9NUG4 571 aaPredicted RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 DLL3Q9NYJ7 618 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 SLC2A6Q9UGQ3 507 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 DMTF1Q9Y222 760 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ARL5AQ9Y689 179 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 AP1M2Q9Y6Q5 423 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PLXNA2O75051 1894 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 LOC100653049A0A140TA62 436 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 SERTM1A2A2V5 107 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 TRIM64A6NGJ6 449 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 OR2AG2A6NM03 316 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 NPIPB8E9PQR5 432 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 GOLGA8TH3BQL2 631 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 SLC30A4O14863 429 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 EEDO75530 441 aaKnown RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 KRT34O76011 436 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 PDE5AO76074 875 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 WDR47O94967 919 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 ESRRBO95718 433 aa4.63□□□□□ -1.67
EDEM3-203ENST00000439962 GOT2P00505 430 aaKnown RBP4.63□□□□□ -1.67
EDEM3-203ENST00000439962 FAM58BPP0C7Q3 252 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms