RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 CDH13P55290 713 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 CDK3Q00526 305 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 GBX1Q14549 363 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 CYHR1Q6ZMK1 362 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 SYT13Q7L8C5 426 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 EFL1Q7Z2Z2 1120 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 DDIASQ8IXT1 998 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 TWIST2Q8WVJ9 160 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 COX14Q96I36 57 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 EGFL8Q99944 293 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 MUC13Q9H3R2 512 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 CLK4Q9HAZ1 481 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 ABCD2Q9UBJ2 740 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 TMEM98Q9Y2Y6 226 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 TNPO3Q9Y5L0 923 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 A0A0C4DFX4 3053 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 A0A1B0GVG6 124 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 TIPRLO75663 272 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 SLCO2B1O94956 709 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 SIX3O95343 332 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 ALDOCP09972 364 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 HIST1H2AGP0C0S8 130 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 IDO1P14902 403 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 HIST1H2ADP20671 130 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 PSMA4P25789 261 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 EEF1DP29692 281 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 PBLDP30039 288 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 MAPK9P45984 424 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 GRIK2Q13002 908 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 FBXO48Q5FWF7 155 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 TBCELQ5QJ74 424 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 INTS11Q5TA45 600 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 FAM219BQ5XKK7 198 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 KANK2Q63ZY3 851 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 HMBOX1Q6NT76 420 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 XKR5Q6UX68 686 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 SPATA19Q7Z5L4 167 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 ZNF547Q8IVP9 402 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 CANT1Q8WVQ1 401 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 ASB12Q8WXK4 309 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 GFM2Q969S9 779 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 TUBGCP3Q96CW5 907 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 HIST1H2AHQ96KK5 128 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 C3orf30Q96M34 536 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 HHIPQ96QV1 700 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 HIST1H2AJQ99878 128 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 MYOCQ99972 504 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 H2AFJQ9BTM1 129 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 TEX101Q9BY14 249 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 RDH14Q9HBH5 336 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 SGK2Q9HBY8 427 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 ACTR3BQ9P1U1 418 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 MAP10Q9P2G4 905 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 RSL24D1Q9UHA3 163 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 MUTYHQ9UIF7 546 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 OR1A2Q9Y585 309 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 CEPT1Q9Y6K0 416 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 DNAH14Q0VDD8 3507 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 LRRC14BA6NHZ5 514 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 PIP5K1BO14986 540 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 CRCPO75575 148 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 TRMUO75648 421 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 ENO2P09104 434 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 ZNF8P17098 575 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 CYP2A7P20853 494 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 FASP25445 335 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 SP140Q13342 867 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 DOK6Q6PKX4 331 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 UBE2R2Q712K3 238 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 GLMNQ92990 594 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 SLC45A3Q96JT2 553 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 FOPNLQ96NB1 174 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 ITM2CQ9NQX7 267 aa12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 USP36Q9P275 1121 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 PTBP2Q9UKA9 531 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-201ENST00000360718 C17orf113A0A1B0GUU1 675 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 DHRS12A0PJE2 317 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 GPR89AB7ZAQ6 455 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 H3BSA7 217 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 SLC16A5O15375 505 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 SLC31A1O15431 190 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 GUCA1CO95843 209 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 GPR89BP0CG08 455 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 FCGR1AP12314 374 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 CDH2P19022 906 aaPredicted RBP12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 IGFALSP35858 605 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 TRIM23P36406 574 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 ALDH3B2P48448 385 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 RPIAP49247 311 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 CCR3P51677 355 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 ESRRGP62508 458 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 PLOD1Q02809 727 aaPredicted RBP12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 VPS26BQ4G0F5 336 aa12.78□□□□□ -0.36
SQSTM1-201ENST00000360718 ZNF658BQ4V348 819 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms