RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 DNASE1L2Q92874 299 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 SGK3Q96BR1 496 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 WBP1Q96G27 269 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 PIWIL1Q96J94 861 aaKnown RBP10.4□□□□□ -0.75
CAPN3-203ENST00000349748 SENP8Q96LD8 212 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 NLKQ9UBE8 527 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 EDARQ9UNE0 448 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 LIPT1Q9Y234 373 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 CITO14578 2027 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 STX16O14662 325 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SIGLEC5O15389 551 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 LDOC1O95751 146 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 C1RP00736 705 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 HRGP04196 525 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 JUPP14923 745 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 ITGB5P18084 799 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SNRPFP62306 86 aaKnown RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SIGLEC14Q08ET2 396 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF648Q5T619 568 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 MAP1SQ66K74 1059 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 PROSER1Q86XN7 944 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SLC44A2Q8IWA5 706 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SLC37A3Q8NCC5 494 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 CLRN3Q8NCR9 226 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SETD9Q8NE22 299 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 NANPQ8TBE9 248 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 UTP15Q8TED0 518 aaKnown RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 UPRTQ96BW1 309 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 TUBGCP3Q96CW5 907 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 ZSWIM3Q96MP5 696 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 TSEN34Q9BSV6 310 aaKnown RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 BARHL1Q9BZE3 327 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF768Q9H5H4 540 aaKnown RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 MRM3Q9HC36 420 aaKnown RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SLC52A3Q9NQ40 469 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 CISHQ9NSE2 258 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SDHAF2Q9NX18 166 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 PLOD3O60568 738 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 CST3P01034 146 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 ANXA6P08133 673 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 HTR1EP28566 365 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 BMP8BP34820 402 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 RAB14P61106 215 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 DGKZQ13574 1117 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 MAD2L1BPQ15013 274 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 FKBP1CQ5VVH2 108 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 MOB2Q70IA6 237 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 BMP8AQ7Z5Y6 402 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 DPP9Q86TI2 863 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 CCDC71Q8IV32 467 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 MFSD6LQ8IWD5 586 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 CDYL2Q8N8U2 506 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 C3orf58Q8NDZ4 430 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 OR6P1Q8NGX9 317 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 IL31RAQ8NI17 732 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 FUBP1Q96AE4 644 aaKnown RBP10.39□□□□□ -0.75
CAPN3-203ENST00000349748 PDXPQ96GD0 296 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 PPM1MQ96MI6 270 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 GPR22Q99680 433 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 APOL2Q9BQE5 337 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 RTP3Q9BQQ7 232 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SETD4Q9NVD3 440 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 COPZ2Q9P299 210 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 LIMD1Q9UGP4 676 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 SRRDQ9UH36 339 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 UBQLN2Q9UHD9 624 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF112Q9UJU3 913 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 MGAT4BQ9UQ53 548 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 PCNTO95613 3336 aa10.39□□□□□ -0.75
CAPN3-203ENST00000349748 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 hCG_1807616A0A1W2PRN6 198 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 WBP4O75554 376 aaKnown RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ITGB1P05556 798 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 PDGFRAP16234 1089 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CYP2F1P24903 491 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 MAPKAPK2P49137 400 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ATP4BP51164 291 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 EEFSECP57772 596 aaKnown RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 PLD1Q13393 1074 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 C21orf62-AS1Q17RA5 79 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 NADSYN1Q6IA69 706 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 KCT2Q8NC54 265 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SMG7Q92540 1137 aaKnown RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 COPS5Q92905 334 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 MRPL57Q9BQC6 102 aaKnown RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ADPGKQ9BRR6 497 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 TEKT3Q9BXF9 490 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ST6GALNAC4Q9H4F1 302 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ACTR8Q9H981 624 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 RRAGCQ9HB90 399 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CCNB1IP1Q9NPC3 277 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SLC22A7Q9Y694 548 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SBF1O95248 1867 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 A8MT66 165 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 H3BM21 787 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 PDE9AO76083 593 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CELF2O95319 508 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms