RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 REXO4Q9GZR2 422 aaKnown RBP17.33■□□□□ 0.36
VHL-202ENST00000345392 NACA2Q9H009 215 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 TNKS2Q9H2K2 1166 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 IL1RAPQ9NPH3 570 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 NOD1Q9Y239 953 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 DLGAP4Q9Y2H0 992 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 SAMHD1Q9Y3Z3 626 aaKnown RBP17.33■□□□□ 0.36
VHL-202ENST00000345392 HSPE1-MOB4S4R3N1 261 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 SAGE2PA6NJ88 616 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 DRGXA6NNA5 263 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 TAF4O00268 1085 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 TUSC3Q13454 348 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 C10orf120Q5SQS8 335 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 HORMAD1Q86X24 394 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 ENTHD1Q8IYW4 607 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 TSSK3Q96PN8 268 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 COPS4Q9BT78 406 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 CDADC1Q9BWV3 514 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 GPRC5BQ9NZH0 403 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 SCML2Q9UQR0 700 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 UGT2A1Q9Y4X1 527 aa17.33■□□□□ 0.36
VHL-202ENST00000345392 ANKRD34BA5PLL1 514 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 STX7O15400 261 aaKnown RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 DNAJA1P31689 397 aaKnown RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 TUBA1BP68363 451 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 USP39Q53GS9 565 aaKnown RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 NADSYN1Q6IA69 706 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 GPR153Q6NV75 609 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 TUBA1AQ71U36 451 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 GALNT13Q8IUC8 556 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 MGME1Q9BQP7 344 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 CINPQ9BW66 212 aaPredicted RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 GABARAPL1Q9H0R8 117 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 MOV10Q9HCE1 1003 aaKnown RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 TM9SF3Q9HD45 589 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 MARCH2Q9P0N8 246 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 VPS9D1Q9Y2B5 631 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 LOC730098B7Z3J9 87 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 FKBP9O95302 570 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 HOXD9P28356 352 aaPredicted RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 NPRL3Q12980 569 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 MAD2L1Q13257 205 aaPredicted RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 TIGD6Q17RP2 521 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 PROX2Q3B8N5 592 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 ZCCHC8Q6NZY4 707 aaKnown RBP17.32■□□□□ 0.36
VHL-202ENST00000345392 TMEM132CQ8N3T6 1108 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 OR51E2Q9H255 320 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 ERVW-1Q9UQF0 538 aa17.32■□□□□ 0.36
VHL-202ENST00000345392 INSIG1O15503 277 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 ERN1O75460 977 aaKnown RBP17.31■□□□□ 0.36
VHL-202ENST00000345392 PTTG1O95997 202 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 EFNA1P20827 205 aaPredicted RBP17.31■□□□□ 0.36
VHL-202ENST00000345392 TACR1P25103 407 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 S100A5P33763 92 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 S100A3P33764 101 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 CTSKP43235 329 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 YBEYP58557 167 aaPredicted RBP17.31■□□□□ 0.36
VHL-202ENST00000345392 MBOAT1Q6ZNC8 495 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 ADAMTSL2Q86TH1 951 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 P3H2Q8IVL5 708 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 SIGLEC11Q96RL6 698 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 CIPCQ9C0C6 399 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 PARVBQ9HBI1 364 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 SAMD4AQ9UPU9 718 aaKnown RBP17.31■□□□□ 0.36
VHL-202ENST00000345392 DHRS7Q9Y394 339 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 ARIH1Q9Y4X5 557 aaPredicted RBP17.31■□□□□ 0.36
VHL-202ENST00000345392 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 SLC28A1O00337 649 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 CCNDBP1O95273 360 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 FABP3P05413 133 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 FPR1P21462 350 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 SLC19A1P41440 591 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 CYP4F2P78329 520 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 CPSF6Q16630 551 aaKnown RBP eCLIP17.31■□□□□ 0.36
VHL-202ENST00000345392 PNCKQ6P2M8 343 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 USP43Q70EL4 1123 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 Q96MT0 163 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 KCNH6Q9H252 994 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 ANKHQ9HCJ1 492 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 AASDHPPTQ9NRN7 309 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 WDR70Q9NW82 654 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 C14orf119Q9NWQ9 140 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 WWOXQ9NZC7 414 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 ZNF451Q9Y4E5 1061 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 PATJQ8NI35 1801 aa17.31■□□□□ 0.36
VHL-202ENST00000345392 KMOO15229 486 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 IL1RNP18510 177 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 PTPN6P29350 595 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 NUDT6P53370 316 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 CRISP3P54108 245 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 FAM189BP81408 668 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 MRPL10Q7Z7H8 261 aaKnown RBP17.3■□□□□ 0.36
VHL-202ENST00000345392 AMER2Q8N7J2 671 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 IPCEF1Q8WWN9 437 aaPredicted RBP17.3■□□□□ 0.36
VHL-202ENST00000345392 ULK4Q96C45 1275 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 EGLN2Q96KS0 407 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 KCNC2Q96PR1 638 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 YME1L1Q96TA2 773 aa17.3■□□□□ 0.36
VHL-202ENST00000345392 TRMT13Q9NUP7 481 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms