RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 MYLK4Q86YV6 388 aaPredicted RBP30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 SMPDL3AQ92484 453 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 NEIL2Q969S2 332 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 TUBGCP3Q96CW5 907 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 CATSPER2Q96P56 530 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 MIR1-1HGQ9H1L0 117 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 TXLNGQ9NUQ3 528 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 MRGBPQ9NV56 204 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 DYRK1BQ9Y463 629 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 SPAG17Q6Q759 2223 aa30.3■■■□□ 2.44
NECTIN3-201ENST00000319792 FFAR3O14843 346 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 GPR42O15529 346 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 ULK1O75385 1050 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 ATP5HO75947 161 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 CD22P20273 847 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 HNF4AP41235 474 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 DOC2AQ14183 400 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 TCEA2Q15560 299 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 CPSF6Q16630 551 aaKnown RBP eCLIP30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 XKR6Q5GH73 641 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 GRHL2Q6ISB3 625 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 SCIMPQ6UWF3 145 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 LAYNQ6UX15 382 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 TRIM46Q7Z4K8 759 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 LONP2Q86WA8 852 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 LMNTD1Q8N9Z9 388 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 OR2T11Q8NH01 316 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 HAUS8Q9BT25 410 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 PCBD2Q9H0N5 130 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 EHD1Q9H4M9 534 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 ZNF624Q9P2J8 865 aaPredicted RBP30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 SNX6Q9UNH7 406 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 CAPN7Q9Y6W3 813 aa30.29■■■□□ 2.44
NECTIN3-201ENST00000319792 UBDO15205 165 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 KDM1AO60341 852 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 UNC5CO95185 931 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 CBX6O95503 412 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 NME1P15531 152 aaKnown RBP30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 LBPP18428 481 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 ZRSR2Q15696 482 aaKnown RBP30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 ZNF542PQ5EBM4 170 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 SUSD1Q6UWL2 747 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 Q6ZSR9 355 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 MAML2Q8IZL2 1156 aaPredicted RBP30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 OR52E1Q8NGJ3 308 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 OR2L8Q8NGY9 312 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 PTCD3Q96EY7 689 aaKnown RBP30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 TAAR2Q9P1P5 351 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 CCL27Q9Y4X3 112 aa30.28■■■□□ 2.44
NECTIN3-201ENST00000319792 SERTM1A2A2V5 107 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 CSF2P04141 144 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 JUNDP17535 347 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 SCTRP47872 440 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 ATP4BP51164 291 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 NXPH1P58417 271 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 ZNF33BQ06732 778 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 LINC01555Q8NAE3 123 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 NSL1Q96IY1 281 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 CAAP1Q9H8G2 361 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 ACTR5Q9H9F9 607 aaPredicted RBP30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 APOBEC3BQ9UH17 382 aaKnown RBP30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 ICKQ9UPZ9 632 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 SH2B3Q9UQQ2 575 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 COPG1Q9Y678 874 aaKnown RBP30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 A0A1W2PPV9 198 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 SLC28A1O00337 649 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 VILLO15195 856 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 CTSEP14091 401 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 KLF10Q13118 480 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 TSTA3Q13630 321 aaPredicted RBP30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 ATG9BQ674R7 924 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 IYDQ6PHW0 289 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 C11orf74Q86VG3 221 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 C1orf210Q8IVY1 113 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 SLC5A11Q8WWX8 675 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 NRTNQ99748 197 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 LRRC61Q9BV99 259 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 GIMAP2Q9UG22 337 aa30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 ZNF490Q9ULM2 529 aaPredicted RBP30.27■■■□□ 2.44
NECTIN3-201ENST00000319792 KNL1Q8NG31 2342 aa30.26■■■□□ 2.44
NECTIN3-201ENST00000319792 H0YIV9 168 aa30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 SLC19A1P41440 591 aa30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 NCALDP61601 193 aa30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 IRX1P78414 480 aaPredicted RBP30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 CXorf40BQ96DE9 158 aa30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 ELOVL6Q9H5J4 265 aa30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 FARSBQ9NSD9 589 aaKnown RBP30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 G3BP2Q9UN86 482 aaKnown RBP30.26■■■□□ 2.43
NECTIN3-201ENST00000319792 BDP1A6H8Y1 2624 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 PRAMEF33A0A0G2JMD5 474 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 HNRNPCL1O60812 293 aaKnown RBP30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 CELA2BP08218 269 aaPredicted RBP30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 ALDOCP09972 364 aaKnown RBP30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 SQLEQ14534 574 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 THEMIS2Q5TEJ8 643 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 FRG2Q64ET8 278 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 SPATA19Q7Z5L4 167 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 TMPRSS11BQ86T26 416 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 SFRP1Q8N474 314 aa30.25■■■□□ 2.43
NECTIN3-201ENST00000319792 MARK4Q96L34 752 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms