RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TAP2Q03519 686 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 ACTN3Q08043 901 aaPredicted RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CDC16Q13042 620 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 EIF2B5Q13144 721 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 PRKG2Q13237 762 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 KRT72Q14CN4 511 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 METTL21CQ5VZV1 264 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 LAYNQ6UX15 382 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CHSY3Q70JA7 882 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 NRROSQ86YC3 692 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 L3MBTL4Q8NA19 623 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 METTL6Q8TCB7 284 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 C12orf66Q96MD2 445 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 HBEGFQ99075 208 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TCEAL2Q9H3H9 227 aaPredicted RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 FARSBQ9NSD9 589 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TBC1D29Q9UFV1 150 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 POLG2Q9UHN1 485 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 KLF15Q9UIH9 416 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 SH2B3Q9UQQ2 575 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TDRKHQ9Y2W6 561 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 COPG1Q9Y678 874 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TP53BP1Q12888 1972 aaPredicted RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SPTY2D1-AS1A0A0U1RR47 76 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 PDZK1P1A8MUH7 402 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 AXIN1O15169 862 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 NDUFS2O75306 463 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 RASGRP1O95267 797 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CLDN9O95484 217 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 LMNAP02545 664 aaKnown RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 PRR35P0CG20 571 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 THEGLP0DJG4 465 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 AOC1P19801 751 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 MAOBP27338 520 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 HMOX2P30519 316 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 NUDT1P36639 197 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 PNLIPRP1P54315 467 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SIGLEC14Q08ET2 396 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 KLF10Q13118 480 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 FZD2Q14332 565 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 ABRAXAS2Q15018 415 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 UAP1L1Q3KQV9 507 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 GGTA1PQ4G0N0 100 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 IL27RAQ6UWB1 636 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SUSD1Q6UWL2 747 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 Q6ZSR9 355 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 EFL1Q7Z2Z2 1120 aaKnown RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 HID1Q8IV36 788 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SYTL1Q8IYJ3 562 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 TBC1D21Q8IYX1 336 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CPSF7Q8N684 471 aaKnown RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 HMGCLL1Q8TB92 370 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 MAGEC3Q8TD91 643 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 RAD51AP1Q96B01 352 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SLC7A6OSQ96CW6 309 aaPredicted RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SGPP1Q9BX95 441 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 TRIT1Q9H3H1 467 aaKnown RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 ACTR8Q9H981 624 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 IMP3Q9NV31 184 aaKnown RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CCL27Q9Y4X3 112 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 DGKBQ9Y6T7 804 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 ABCA7Q8IZY2 2146 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 A0A1W2PR77 199 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 A6NCN8 305 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 MANBAO00462 879 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 WFS1O76024 890 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CHEK2O96017 543 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CELA2BP08218 269 aaPredicted RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CD27P26842 260 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CPA2P48052 419 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 RPL6Q02878 288 aaKnown RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CHIT1Q13231 466 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 NAA25Q14CX7 972 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 RPE65Q16518 533 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CPSF6Q16630 551 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 ZNF542PQ5EBM4 170 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CAPN13Q6MZZ7 669 aaPredicted RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SLC30A9Q6PML9 568 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 TSSK4Q6SA08 328 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 ASRGL1Q7L266 308 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 MYLK4Q86YV6 388 aaPredicted RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 C10orf67Q8IYJ2 551 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SFRP1Q8N474 314 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 KIF2BQ8N4N8 673 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 C2orf73Q8N5S3 287 aaPredicted RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 POU5F2Q8N7G0 328 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CADM4Q8NFZ8 388 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 USP7Q93009 1102 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 NEIL2Q969S2 332 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 TUBGCP3Q96CW5 907 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 NSL1Q96IY1 281 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CAMK1GQ96NX5 476 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 FERD3LQ96RJ6 166 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 SLC29A3Q9BZD2 475 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 PCED1AQ9H1Q7 454 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 ACTR5Q9H9F9 607 aaPredicted RBP6.74□□□□□ -1.33
PTCD2-201ENST00000308077 AASDHPPTQ9NRN7 309 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 TXLNGQ9NUQ3 528 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 CAPN7Q9Y6W3 813 aa6.74□□□□□ -1.33
PTCD2-201ENST00000308077 PCM1Q15154 2024 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms