RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 OR4K3Q96R72 315 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 UBE2ZQ9H832 354 aaPredicted RBP13.83□□□□□ -0.19
C9orf3-202ENST00000297979 SPAG4Q9NPE6 437 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 C1orf109Q9NX04 203 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 DOCK9Q9BZ29 2069 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 UNC80Q8N2C7 3258 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 A0A1W2PP18 115 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 E7ENX8 843 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 E7EQ34 232 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 C7P10643 843 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 ACADMP11310 421 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 ME2P23368 584 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 IGFALSP35858 605 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 CCNIQ14094 377 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 XKR6Q5GH73 641 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 ZFAND4Q86XD8 727 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 SYTL1Q8IYJ3 562 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-202ENST00000297979 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 MRGPRX1Q96LB2 322 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 PHF7Q9BWX1 381 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-202ENST00000297979 MRPL40Q9NQ50 206 aaKnown RBP13.83□□□□□ -0.2
C9orf3-202ENST00000297979 ITM2CQ9NQX7 267 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 TM7SF3Q9NS93 570 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 ASIC5Q9NY37 505 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 MAP10Q9P2G4 905 aa13.83□□□□□ -0.2
C9orf3-202ENST00000297979 STX18Q9P2W9 335 aaKnown RBP13.83□□□□□ -0.2
C9orf3-202ENST00000297979 CCDC154A6NI56 674 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 NARSO43776 548 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 FKBP6O75344 327 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 SEC22BO75396 215 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 RSL1D1O76021 490 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 IL12AP29459 219 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 MAT2AP31153 395 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 TBPL1P62380 186 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 PCDH1Q08174 1060 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 PRKG2Q13237 762 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 FRG2Q64ET8 278 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 CAPN13Q6MZZ7 669 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 FAM3CQ92520 227 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 FRG2BQ96QU4 278 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 GPRC5BQ9NZH0 403 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 ASF1AQ9Y294 204 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 TRIM38O00635 465 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 MSL3P1P0C860 447 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 XRCC1P18887 633 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 GNAZP19086 355 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 CD22P20273 847 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 NEK2P51955 445 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 PPP2CBP62714 309 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 AP2B1P63010 937 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 PPP2CAP67775 309 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 DOC2AQ14183 400 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 CACHD1Q5VU97 1274 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 METRNLQ641Q3 311 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 AAGABQ6PD74 315 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 KIAA1324Q6UXG2 1013 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 CCBE1Q6UXH8 406 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 FAM124AQ86V42 546 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 PEX5LQ8IYB4 626 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 RNF148Q8N7C7 305 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 ACTL8Q9H568 366 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 GID8Q9NWU2 228 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 SERTM1A2A2V5 107 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 ANKRD28O15084 1053 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 EEDO75530 441 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 JAK1P23458 1154 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 HNF4AP41235 474 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 ZNF33BQ06732 778 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 EIF2B5Q13144 721 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 CCINQ13939 588 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 GRHL2Q6ISB3 625 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 TMEM92Q6UXU6 159 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 VPS33AQ96AX1 596 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 RSRC1Q96IZ7 334 aaKnown RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 HOPXQ9BPY8 73 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 C6orf203Q9P0P8 240 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 STOML1Q9UBI4 398 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 LEF1Q9UJU2 399 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-202ENST00000297979 KCNE2Q9Y6J6 123 aa13.82□□□□□ -0.2
C9orf3-202ENST00000297979 A0A1W2PPC1 479 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 NDUFV2P19404 249 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 PRPH2P23942 346 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 SH3BGRP55822 239 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-202ENST00000297979 TIGD2Q4W5G0 525 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 PRMT9Q6P2P2 845 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 DCUN1D3Q8IWE4 304 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 SLC26A7Q8TE54 656 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 ASB12Q8WXK4 309 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 TFGQ92734 400 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-202ENST00000297979 GPATCH1Q9BRR8 931 aaKnown RBP13.81□□□□□ -0.2
C9orf3-202ENST00000297979 SGPP1Q9BX95 441 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 FZD3Q9NPG1 666 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 TMEM181Q9P2C4 612 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 MMP17Q9ULZ9 603 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 PSMD13Q9UNM6 376 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 NUMA1Q14980 2115 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 ASPDHA6ND91 283 aa13.81□□□□□ -0.2
C9orf3-202ENST00000297979 SHISA7A6NL88 538 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms