RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SCARB2Q14108 478 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 SPANXN4Q5MJ08 99 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 SLC35G5Q96KT7 338 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 NDUFB5O43674 189 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 MAT2AP31153 395 aaKnown RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 ANGPT1Q15389 498 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 MZT2BQ6NZ67 158 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 GRASPQ7Z6J2 395 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 P2RY8Q86VZ1 359 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 HEATR4Q86WZ0 1026 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 CHCHD4Q8N4Q1 142 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 FAM120CQ9NX05 1096 aaKnown RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 KAT6AQ92794 2004 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 GSRP00390 522 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 ANXA8P13928 327 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 ACRV1P26436 265 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 GMPRP36959 345 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 BDKRB1P46663 353 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 LGALS3BPQ08380 585 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 TRPV1Q8NER1 839 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 ST13P5Q8NFI4 369 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 MOCOSQ96EN8 888 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 THUMPD1Q9NXG2 353 aaKnown RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 SATB2Q9UPW6 733 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 OARD1Q9Y530 152 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 LAMP2P13473 410 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 CD247P20963 164 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 GCAP28676 217 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 DNAJA1P31689 397 aaKnown RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 C1QTNF8P60827 252 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 ABHD18Q0P651 414 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 CCDC157Q569K6 752 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 TRNP1Q6NT89 227 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 PSAPL1Q6NUJ1 521 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 CAMKK1Q8N5S9 505 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 PRR11Q96HE9 360 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 SRMSQ9H3Y6 488 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 FAM86C2PA6NEL3 165 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 IFNGP01579 166 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 PIK3CBP42338 1070 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 SLC9A5Q14940 896 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 NDUFA9Q16795 377 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 KLHL12Q53G59 568 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 RBM48Q5RL73 367 aaKnown RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 ADGRG6Q86SQ4 1221 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 FAM129CQ86XR2 697 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 GTPBP3Q969Y2 492 aaKnown RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 SPRTNQ9H040 489 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 ETAA1Q9NY74 926 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 TCRBV5S1A1TA0A578 114 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 TMEM189-UBE2V1I3L0A0 370 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 C4BPBP20851 252 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 NT5EP21589 574 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 CLK3P49761 638 aaKnown RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 KHKP50053 298 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 NCEH1Q6PIU2 408 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 FAM220AQ7Z4H9 259 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 SYVN1Q86TM6 617 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 GPATCH1Q9BRR8 931 aaKnown RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 SLC35A5Q9BS91 424 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF598Q86UK7 904 aaKnown RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 TMEM27Q9HBJ8 222 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 SPATA7Q9P0W8 599 aa16.31■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF624Q9P2J8 865 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-201ENST00000264555 WASH4PA8MWX3 477 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 HMGCLP35914 325 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 GALNT1Q10472 559 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-201ENST00000264555 Q6ZVL8 140 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 CMTR2Q8IYT2 770 aaKnown RBP16.3■□□□□ 0.2
PHRF1-201ENST00000264555 RAB2BQ8WUD1 216 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 KLK6Q92876 244 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 H3BNH8 94 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 HLA-DQA2P01906 255 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 ACP5P13686 325 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 GGT5P36269 586 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 GRIK2Q13002 908 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 VMP1Q96GC9 406 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 PGAP2Q9UHJ9 254 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 RIMKLBQ9ULI2 386 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
PHRF1-201ENST00000264555 MMP20O60882 483 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 GRB7Q14451 532 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 UBASH3BQ8TF42 649 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 RGMAQ96B86 450 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 POLR1DQ9Y2S0 133 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 TP73O15350 636 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 NME6O75414 186 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-201ENST00000264555 OR2T5Q6IEZ7 315 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 DENND5AQ6IQ26 1287 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 TNFAIP8L2Q6P589 184 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-201ENST00000264555 TAF8Q7Z7C8 310 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 OR2T29Q8NH02 315 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 SMPDL3AQ92484 453 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 L3HYPDHQ96EM0 354 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 LMLNQ96KR4 655 aa16.3■□□□□ 0.2
PHRF1-201ENST00000264555 SPHK2Q9NRA0 654 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms