RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 PLD3Q8IV08 490 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 SLC22A9Q8IVM8 553 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 DDIASQ8IXT1 998 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 MYO1HQ8N1T3 1032 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 TMEM132CQ8N3T6 1108 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 FAM109AQ8N4B1 249 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 STX19Q8N4C7 294 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 KBTBD8Q8NFY9 601 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 SPATA18Q8TC71 538 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 HCAR2Q8TDS4 363 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 CYGBQ8WWM9 190 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 JDP2Q8WYK2 163 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 LRTOMTQ8WZ04 291 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 LPGAT1Q92604 370 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 PEX13Q92968 403 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 MUL1Q969V5 352 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 RCN3Q96D15 328 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 MTFMTQ96DP5 389 aaKnown RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 RNF31Q96EP0 1072 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 C1GALT1C1Q96EU7 318 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 MAELQ96JY0 434 aaKnown RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 TNIP3Q96KP6 325 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 C8orf48Q96LL4 319 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 ZNF578Q96N58 590 aaPredicted RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 DMRTA2Q96SC8 542 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 KLF6Q99612 283 aaPredicted RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 FEM1AQ9BSK4 669 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 TEX101Q9BY14 249 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 MTMR12Q9C0I1 747 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 RACGAP1Q9H0H5 632 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 ARMC7Q9H6L4 198 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 ATP13A3Q9H7F0 1226 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 NIPAL2Q9H841 368 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 NOL11Q9H8H0 719 aaKnown RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 LIN28AQ9H9Z2 209 aaKnown RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 AS3MTQ9HBK9 375 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 NMRAL1Q9HBL8 299 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 POPDC2Q9HBU9 364 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 TBC1D22BQ9NU19 505 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 RLIMQ9NVW2 624 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 SMOXQ9NWM0 555 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 B3GNT2Q9NY97 397 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 CCDC59Q9P031 241 aaKnown RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 NYAP2Q9P242 653 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 CFAP97Q9P2B7 532 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 KLHL21Q9UJP4 597 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 KIAA1257Q9ULG3 409 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 VANGL2Q9ULK5 521 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 VPS4AQ9UN37 437 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 PDE10AQ9Y233 779 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 NAALAD2Q9Y3Q0 740 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 HS3ST4Q9Y661 456 aa5.48□□□□□ -1.53
CHD9-210ENST00000564582 TRPM3Q9HCF6 1732 aaPredicted RBP5.48□□□□□ -1.53
CHD9-210ENST00000564582 RGPD8O14715 1765 aaPredicted RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 SCN7AQ01118 1682 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 ALS2Q96Q42 1657 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 IGKV6D-41A0A0C4DH26 115 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 FAM170AA1A519 330 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 MARCH11A6NNE9 402 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 GOLGA8SH3BPF8 625 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 H7C0C1 242 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 PSMD11O00231 422 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 PLK4O00444 970 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 TNPO2O14787 897 aaKnown RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 ADAMTS3O15072 1205 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 UBDO15205 165 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 MSH4O15457 936 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 CA12O43570 354 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 AKAP8O43823 692 aaKnown RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 EDIL3O43854 480 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 EXTL3O43909 919 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 NOS1APO75052 506 aaPredicted RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 PSMD10O75832 226 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 BBOX1O75936 387 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 NADKO95544 446 aaPredicted RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 CHRNA1P02708 482 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 C1QAP02745 245 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 TFPTP0C1Z6 253 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 CYP19A1P11511 503 aaPredicted RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 CRHBPP24387 322 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 CXCR2P25025 360 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 PSMA2P25787 234 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 HMGB2P26583 209 aaKnown RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 SLC26A3P40879 764 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 OPRL1P41146 370 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 ATP5OP48047 213 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 PIK3CGP48736 1102 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 TKTL1P51854 596 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 ZNF135P52742 658 aaPredicted RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 HK3P52790 923 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 EEFSECP57772 596 aaKnown RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 TAS2R40P59535 323 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 SNAP25P60880 206 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 PSMC5P62195 406 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 RPS8P62241 208 aaKnown RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 YWHAZP63104 245 aaKnown RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 BLOC1S1P78537 153 aa5.47□□□□□ -1.53
CHD9-210ENST00000564582 ADARB1P78563 741 aaKnown RBP5.47□□□□□ -1.53
CHD9-210ENST00000564582 HSD11B2P80365 405 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms