RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GCNT6Q5T4J0 391 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 FIGLAQ6QHK4 219 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 FAM198BQ6UWH4 519 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 CAMKMTQ7Z624 323 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 CEP57L1Q8IYX8 460 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 MAML2Q8IZL2 1156 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-218ENST00000556256 FBXO39Q8N4B4 442 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 GBGT1Q8N5D6 347 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 TSPAN14Q8NG11 270 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 OR2AJ1Q8NGZ0 328 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 MOSPD2Q8NHP6 518 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 PPP4R1Q8TF05 950 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 SPACA9Q96E40 222 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-218ENST00000556256 MS4A10Q96PG2 267 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 BAG1Q99933 345 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-218ENST00000556256 ABHD6Q9BV23 337 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 ANKRD2Q9GZV1 360 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 HHATLQ9HCP6 504 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 PRMT7Q9NVM4 692 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-218ENST00000556256 GPR83Q9NYM4 423 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 NPAP1Q9NZP6 1156 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 CFDP1Q9UEE9 299 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-218ENST00000556256 NME7Q9Y5B8 376 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 IGHV4-4A0A075B6R2 117 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 ANKUB1A6NFN9 424 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 URADA6NGE7 173 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 C15orf62A8K5M9 175 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-218ENST00000556256 PTGESO14684 152 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 GPR137BO60478 399 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 BMP10O95393 424 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 LINGO3P0C6S8 592 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 MYBL1P10243 752 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 GJA1P17302 382 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 CPT2P23786 658 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 HNF4AP41235 474 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 DUOXA1Q1HG43 343 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 KLHL26Q53HC5 615 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 ASPRV1Q53RT3 343 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 C2CD6Q53TS8 623 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 RNASEH2BQ5TBB1 312 aaKnown RBP2.71□□□□□ -1.98
SCFD1-218ENST00000556256 ARHGEF16Q5VV41 709 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 PACS1Q6VY07 963 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 PTOV1Q86YD1 416 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 L3MBTL4Q8NA19 623 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 EXD1Q8NHP7 514 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 CYYR1Q96J86 154 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 CFAP57Q96MR6 1250 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 LRRC3BQ96PB8 259 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 SOSTQ9BQB4 213 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 LRRC61Q9BV99 259 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 DPAGT1Q9H3H5 408 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 GOLPH3LQ9H4A5 285 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 ST6GALNAC4Q9H4F1 302 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 RABEP2Q9H5N1 569 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 DDX25Q9UHL0 483 aaKnown RBP2.71□□□□□ -1.98
SCFD1-218ENST00000556256 KAT6BQ8WYB5 2073 aa2.71□□□□□ -1.98
SCFD1-218ENST00000556256 SOS1Q07889 1333 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 EDDM13A0A1B0GTR0 161 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 BCL2L11O43521 198 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 XRCC3O43542 346 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 TRUB2O95900 331 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 PFKFB1P16118 471 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 DNASE1P24855 282 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 EEF1DP29692 281 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 GABRA5P31644 462 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 MC5RP33032 325 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 ZNF41P51814 821 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 PRPF4BQ13523 1007 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 TAF1BQ53T94 588 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 FAM133BQ5BKY9 247 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 C1orf141Q5JVX7 400 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 KRT80Q6KB66 452 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 KRT77Q7Z794 578 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 TMEM173Q86WV6 379 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 TICAM2Q86XR7 235 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 HPS6Q86YV9 775 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 ZNF843Q8N446 348 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 Q8NFD4 153 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 DAZLQ92904 295 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 TMEM143Q96AN5 459 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 RADILQ96JH8 1075 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 CNDP2Q96KP4 475 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 FAM81BQ96LP2 452 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 BTBD10Q9BSF8 475 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 TRIM6Q9C030 488 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 WNT5BQ9H1J7 359 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 NOL11Q9H8H0 719 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 PIH1D3Q9NQM4 214 aaKnown RBP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 ECHDC1Q9NTX5 307 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 OSER1Q9NX31 292 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 MIOSQ9NXC5 875 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 BCCIPQ9P287 314 aaKnown RBP eCLIP2.7□□□□□ -1.98
SCFD1-218ENST00000556256 LRWD1Q9UFC0 647 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 CELA1Q9UNI1 258 aa2.7□□□□□ -1.98
SCFD1-218ENST00000556256 A0A1W2PPQ1 181 aa2.69□□□□□ -1.98
SCFD1-218ENST00000556256 ELOVL7A1L3X0 281 aa2.69□□□□□ -1.98
SCFD1-218ENST00000556256 TADA2AO75478 443 aa2.69□□□□□ -1.98
SCFD1-218ENST00000556256 SLCO2B1O94956 709 aa2.69□□□□□ -1.98
SCFD1-218ENST00000556256 GGPS1O95749 300 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms