RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 WBP1Q96G27 269 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PYURFQ96I23 114 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CTRCQ99895 268 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 HGH1Q9BTY7 390 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MRPL9Q9BYD2 267 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LHPPQ9H008 270 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SAP130Q9H0E3 1048 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RMND5AQ9H871 391 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 C1GALT1Q9NS00 363 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RBM22Q9NW64 420 aaKnown RBP eCLIP3.35□□□□□ -1.871e-10■■■□□ 17.9
SEC23A-207ENST00000554615 ZNF226Q9NYT6 803 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ANKMY1Q9P2S6 941 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 METRNQ9UJH8 293 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TBX21Q9UL17 535 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PIN4Q9Y237 131 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CPQQ9Y646 472 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 NRG2O14511 850 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 AIM2O14862 343 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF749O43361 778 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 COCHO43405 550 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SMIM24O75264 130 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TRIM3O75382 744 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GLP2RO95838 553 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 EPPINO95925 133 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 IGHA1P01876 353 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SOD2P04179 222 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ALPPP05187 535 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GALTP07902 379 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ANXA6P08133 673 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RPSAP08865 295 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PIGAP37287 484 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PLA2G16P53816 162 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PTSQ03393 145 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 C19orf57Q0VDD7 668 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CTBP1Q13363 440 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 FHL1Q13642 323 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF460Q14592 562 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 INPP5AQ14642 412 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF77Q15935 545 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 DDR2Q16832 855 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PRSS53Q2L4Q9 553 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 FBXO43Q4G163 708 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LDLRAP1Q5SW96 308 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF648Q5T619 568 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 C9orf131Q5VYM1 1079 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TIGD3Q6B0B8 471 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LINC00114Q6XXX2 140 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 RNF19BQ6ZMZ0 732 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 GPRIN3Q6ZVF9 776 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 MOB2Q70IA6 237 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CDR2LQ86X02 465 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF280BQ86YH2 543 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 TRAM1L1Q8N609 369 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF557Q8N988 423 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 IPMKQ8NFU5 416 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 BLOC1S5Q8TDH9 187 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 DNAJC1Q96KC8 554 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 NSUN5Q96P11 429 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CHRNA10Q9GZZ6 450 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 COPS7BQ9H9Q2 264 aaPredicted RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PELI2Q9HAT8 420 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 IL21RQ9HBE5 538 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 LHX9Q9NQ69 397 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 STARD7Q9NQZ5 370 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 DNAAF2Q9NVR5 837 aaKnown RBP3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ZDHHC3Q9NYG2 299 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 VAPAQ9P0L0 249 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 ADGRE2Q9UHX3 823 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 SLC39A10Q9ULF5 831 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 CORO2BQ9UQ03 480 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 NPTNQ9Y639 398 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 PCDH15Q96QU1 1955 aa3.35□□□□□ -1.87
SEC23A-207ENST00000554615 A0A0U1RQS6 177 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 TTLL8A6PVC2 850 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 K7EPI3 171 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 KCNK1O00180 336 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ARVCFO00192 962 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PPP6CO00743 305 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 UGT2B17O75795 530 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 SEC24AO95486 1093 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 OXSR1O95747 527 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 OTCP00480 354 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 FUCA1P04066 466 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 STSP08842 583 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ARSAP15289 507 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CEBPBP17676 345 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PPIBP23284 216 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 FASP25445 335 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 PRDX3P30048 256 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 FGF9P31371 208 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 GNPDA1P46926 289 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 UGT2B15P54855 530 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 UFM1P61960 85 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 MRPS22P82650 360 aaKnown RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CDK5Q00535 292 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CYP4F3Q08477 520 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 ABRAXAS2Q15018 415 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 CARD16Q5EG05 197 aa3.34□□□□□ -1.87
SEC23A-207ENST00000554615 TCHHL1Q5QJ38 904 aaPredicted RBP3.34□□□□□ -1.87
SEC23A-207ENST00000554615 MEDAGQ5VYS4 303 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms