RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TMEM74Q96NL1 305 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 MYADMQ96S97 322 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 FAM129BQ96TA1 746 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 NUSAP1Q9BXS6 441 aaKnown RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 OR2AG1Q9H205 316 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SLC28A3Q9HAS3 691 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SPAG4Q9NPE6 437 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ZNF490Q9ULM2 529 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 USP22Q9UPT9 525 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SLC27A6Q9Y2P4 619 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 NDUFAF1Q9Y375 327 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 NOX1Q9Y5S8 564 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TNRC18O15417 2968 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 PRR23AA6NEV1 266 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 CFAP99D6REC4 459 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 WNT9AO14904 365 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SEC24DO94855 1032 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 PTPN5P54829 565 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SEC13P55735 322 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TMEM115Q12893 351 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 RAET1GQ6H3X3 334 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 NEK5Q6P3R8 708 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SYCE2Q6PIF2 218 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TERB1Q8NA31 727 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 BTN2A2Q8WVV5 523 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ASB11Q8WXH4 323 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 PARVBQ9HBI1 364 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TRPV5Q9NQA5 729 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ITGB1BP2Q9UKP3 347 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 GPC6Q9Y625 555 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ZFC3H1O60293 1989 aaKnown RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 LZTS3O60299 673 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SLC22A3O75751 556 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SULT1C4O75897 302 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 PRR35P0CG20 571 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TCF3P15923 654 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 NAT1P18440 290 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 GJA4P35212 333 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 OPRD1P41143 372 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ZFP36L2P47974 494 aaKnown RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 EIF2B2P49770 351 aaKnown RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ERVK-8P63133 956 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 DLX2Q07687 328 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 CYP2A13Q16696 494 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 DEPDC1Q5TB30 811 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 DOK6Q6PKX4 331 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 BLOC1S3Q6QNY0 202 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 CRTC3Q6UUV7 619 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 PARM1Q6UWI2 310 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ZBTB46Q86UZ6 589 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TRAPPC5Q8IUR0 188 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 PLPP6Q8IY26 295 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TRAM1L1Q8N609 369 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 LRTOMTQ8WZ04 291 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 OR8D1Q8WZ84 308 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 MED8Q96G25 268 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 CIB1Q99828 191 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ZSCAN5AQ9BUG6 496 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 RIC8BQ9NVN3 520 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 GON4LQ3T8J9 2241 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 FXYD1O00168 92 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 TRIM38O00635 465 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 NME4O00746 187 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ACOT8O14734 319 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 HIST1H2AGP0C0S8 130 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 C6P13671 934 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PSMC3P17980 439 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 HIST1H2ADP20671 130 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 KCNK10P57789 538 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 KCNC3Q14003 757 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 TMEM102Q8N9M5 508 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 SCAIQ8N9R8 606 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PROKR1Q8TCW9 393 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 WFIKKN2Q8TEU8 576 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 SUSD6Q92537 303 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 HIST1H2AHQ96KK5 128 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 NRTNQ99748 197 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 HIST1H2AJQ99878 128 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 H2AFJQ9BTM1 129 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 CAAP1Q9H8G2 361 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 INTS7Q9NVH2 962 aaKnown RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PCYT1BQ9Y5K3 369 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 LAMA1P25391 3075 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 CXorf51AA0A1B0GTR3 108 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 TSPAN11A1L157 253 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 H3BNH8 94 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 J3QRK9 145 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 AKAP10O43572 662 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PRAMEF4O60810 478 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ULK1O75385 1050 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 RNASEH2AO75792 299 aaKnown RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 H6PDO95479 791 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PRNPP04156 253 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ADRB3P13945 408 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 GDI1P31150 447 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ATP4BP51164 291 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 CLCN2P51788 898 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms