RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 FAM227AF5H4B4 570 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 H3BM21 787 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 GABRDO14764 452 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 FGF10O15520 208 aaPredicted RBP14.31□□□□□ -0.12
HOXC11-202ENST00000546378 ACPPP15309 386 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 PTGER1P34995 402 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 CREMQ03060 361 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 MGAT3Q09327 533 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 CLCA4Q14CN2 919 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 PRSS36Q5K4E3 855 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 LAIR1Q6GTX8 287 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 ARRDC2Q8TBH0 407 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 LKAAEAR1Q8TD35 194 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 KIAA1191Q96A73 305 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 ZNF599Q96NL3 588 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 LINC00597Q9H2U6 94 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 ADPRHL2Q9NX46 363 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 PDZK1P1A8MUH7 402 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 DNAJB2P25686 324 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 SUSD1Q6UWL2 747 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 B3GNT8Q7Z7M8 397 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 TCAIMQ8N3R3 496 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 ZNF420Q8TAQ5 688 aaPredicted RBP14.31□□□□□ -0.12
HOXC11-202ENST00000546378 PCNPQ8WW12 178 aaKnown RBP14.31□□□□□ -0.12
HOXC11-202ENST00000546378 COPS4Q9BT78 406 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 RAD18Q9NS91 495 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 UBA2Q9UBT2 640 aaPredicted RBP14.31□□□□□ -0.12
HOXC11-202ENST00000546378 FAM32AQ9Y421 112 aaKnown RBP14.31□□□□□ -0.12
HOXC11-202ENST00000546378 UGT2A1Q9Y4X1 527 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 ALPK2Q86TB3 2170 aa14.31□□□□□ -0.12
HOXC11-202ENST00000546378 FFAR2O15552 330 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 SOX14O95416 240 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 STSP08842 583 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 SGSHP51688 502 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 RNF219Q5W0B1 726 aaPredicted RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 MSANTD2Q6P1R3 559 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 ANKRD13BQ86YJ7 626 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 BRSK1Q8TDC3 778 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 ASIC4Q96FT7 647 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 TRPV5Q9NQA5 729 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 TBCCD1Q9NVR7 557 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 IMPAD1Q9NX62 359 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 SLC25A37Q9NYZ2 338 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 ABCD2Q9UBJ2 740 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 CTDSP2O14595 271 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 INSIG1O15503 277 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 RGS10O43665 173 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 GJB5O95377 273 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 RHOCP08134 193 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 SOAT1P35610 550 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 CRATP43155 626 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 TMBIM6P55061 237 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 SPOUT1Q5T280 376 aaKnown RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 TRAF7Q6Q0C0 670 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 DLEU7Q6UYE1 221 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 SLC16A12Q6ZSM3 486 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 CACUL1Q86Y37 369 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 DCP2Q8IU60 420 aaKnown RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 RBM4BQ9BQ04 359 aaKnown RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 TTPALQ9BTX7 342 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 RBM4Q9BWF3 364 aaKnown RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 LRTM1Q9HBL6 345 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 DNAJB9Q9UBS3 223 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 PTBP2Q9UKA9 531 aaKnown RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 AGO1Q9UL18 857 aaKnown RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 PRAMEF1O95521 474 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 CYP11A1P05108 521 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 CA5AP35218 305 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 EMX2Q04743 252 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 IER5LQ5T953 404 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 ADNP2Q6IQ32 1131 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 PRSS55Q6UWB4 352 aaPredicted RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 RFLNAQ6ZTI6 216 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 BCDIN3DQ7Z5W3 292 aaKnown RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 ZFAND4Q86XD8 727 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 BEND7Q8N7W2 519 aaPredicted RBP14.3□□□□□ -0.12
HOXC11-202ENST00000546378 L3HYPDHQ96EM0 354 aa14.3□□□□□ -0.12
HOXC11-202ENST00000546378 EVPLLA8MZ36 301 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 UPK1AO00322 258 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 EEDO75530 441 aaKnown RBP14.29□□□□□ -0.12
HOXC11-202ENST00000546378 SEC14L2O76054 403 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 ENO2P09104 434 aaPredicted RBP14.29□□□□□ -0.12
HOXC11-202ENST00000546378 CCL5P13501 91 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 HCAR3P49019 387 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 RHOAP61586 193 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 UPP1Q16831 310 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 STEAP3Q658P3 488 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 SLC24A5Q71RS6 500 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 ATP6V0D2Q8N8Y2 350 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 NUAK2Q9H093 628 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 ACTL8Q9H568 366 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 PLSCR3Q9NRY6 295 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 KLHL3Q9UH77 587 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 ACSL6Q9UKU0 697 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 SLC6A14Q9UN76 642 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 GNG14A0A1W2PPG7 69 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 CCRL2O00421 344 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 ZNF24P17028 368 aa14.29□□□□□ -0.12
HOXC11-202ENST00000546378 CST5P28325 142 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms