RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PTCD3Q96EY7 689 aaKnown RBP18.85■□□□□ 0.61
SKP2-208ENST00000546211 MIPEPQ99797 713 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 SGPP1Q9BX95 441 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 TMEM168Q9H0V1 697 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 ZNF385DQ9H6B1 395 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 MVB12BQ9H7P6 319 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 GPR27Q9NS67 375 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 TAGLN3Q9UI15 199 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 PLAGL1Q9UM63 463 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 SNX6Q9UNH7 406 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 DYRK1BQ9Y463 629 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 E7EQ34 232 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 MANBAO00462 879 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 GNAZP19086 355 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 AK4P27144 223 aaPredicted RBP18.85■□□□□ 0.61
SKP2-208ENST00000546211 ACTR1BP42025 376 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 ACTR1AP61163 376 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 ILF3Q12906 894 aaKnown RBP eCLIP18.85■□□□□ 0.61
SKP2-208ENST00000546211 ABRAXAS2Q15018 415 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 RPE65Q16518 533 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 CPSF6Q16630 551 aaKnown RBP eCLIP18.85■□□□□ 0.61
SKP2-208ENST00000546211 XKR6Q5GH73 641 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 CWF19L1Q69YN2 538 aaKnown RBP18.85■□□□□ 0.61
SKP2-208ENST00000546211 WASH2PQ6VEQ5 465 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 LRRC56Q8IYG6 542 aaPredicted RBP18.85■□□□□ 0.61
SKP2-208ENST00000546211 RGL4Q8IZJ4 473 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 MARK4Q96L34 752 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 IL17FQ96PD4 163 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 OR4K3Q96R72 315 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 WASH6PQ9NQA3 447 aa18.85■□□□□ 0.61
SKP2-208ENST00000546211 PNMA8BQ9ULN7 279 aaPredicted RBP18.85■□□□□ 0.61
SKP2-208ENST00000546211 COPG1Q9Y678 874 aaKnown RBP18.85■□□□□ 0.61
SKP2-208ENST00000546211 SLC28A1O00337 649 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 KDM1AO60341 852 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 ERGP11308 486 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 JUPP14923 745 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 ACTN3Q08043 901 aaPredicted RBP18.84■□□□□ 0.61
SKP2-208ENST00000546211 PCDH1Q08174 1060 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 SQLEQ14534 574 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 THEMIS2Q5TEJ8 643 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 SLC30A9Q6PML9 568 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 ABRAXAS1Q6UWZ7 409 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 SETD7Q8WTS6 366 aaKnown RBP18.84■□□□□ 0.61
SKP2-208ENST00000546211 KLHL29Q96CT2 875 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 CMTM5Q96DZ9 223 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 CAMK1GQ96NX5 476 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 RAB11FIP5Q9BXF6 653 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 ELOVL6Q9H5J4 265 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 SPATA6Q9NWH7 488 aaPredicted RBP18.84■□□□□ 0.61
SKP2-208ENST00000546211 DLGAP2Q9P1A6 1054 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 TBC1D29Q9UFV1 150 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 ZNF490Q9ULM2 529 aaPredicted RBP18.84■□□□□ 0.61
SKP2-208ENST00000546211 COLEC10Q9Y6Z7 277 aa18.84■□□□□ 0.61
SKP2-208ENST00000546211 KCNE1BA0A087WTH5 132 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 OR52A4PA6NMU1 304 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 RGS14O43566 566 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 PEX11AO75192 247 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 MTHFD1P11586 935 aaKnown RBP18.83■□□□□ 0.6
SKP2-208ENST00000546211 PRDX6P30041 224 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 HNF4AP41235 474 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 STX1BP61266 288 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 FASTKQ14296 549 aaKnown RBP18.83■□□□□ 0.6
SKP2-208ENST00000546211 FZD2Q14332 565 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 TCEA2Q15560 299 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 ZRSR2Q15696 482 aaKnown RBP18.83■□□□□ 0.6
SKP2-208ENST00000546211 CYP2A13Q16696 494 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 ATP6AP1LQ52LC2 224 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 SUSD1Q6UWL2 747 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 SPATA19Q7Z5L4 167 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 MFSD2AQ8NA29 543 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 CCL4L1Q8NHW4 92 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 GIMAP2Q9UG22 337 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 PCOLCE2Q9UKZ9 415 aa18.83■□□□□ 0.6
SKP2-208ENST00000546211 DNAJC8O75937 253 aaPredicted RBP18.82■□□□□ 0.6
SKP2-208ENST00000546211 WFS1O76024 890 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 PDGFBP01127 241 aaPredicted RBP18.82■□□□□ 0.6
SKP2-208ENST00000546211 PRR35P0CG20 571 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 EZRP15311 586 aaKnown RBP18.82■□□□□ 0.6
SKP2-208ENST00000546211 NPPBP16860 134 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 PIK3R1P27986 724 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 NDUFS1P28331 727 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 CD38P28907 300 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 ATP4BP51164 291 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 BLKP51451 505 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 MNAT1P51948 309 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 CORO7P57737 925 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 RACK1P63244 317 aaKnown RBP18.82■□□□□ 0.6
SKP2-208ENST00000546211 IRX1P78414 480 aaPredicted RBP18.82■□□□□ 0.6
SKP2-208ENST00000546211 EIF2B5Q13144 721 aaKnown RBP18.82■□□□□ 0.6
SKP2-208ENST00000546211 DOC2AQ14183 400 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 NAA25Q14CX7 972 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 IMPG1Q17R60 797 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 SGO1Q5FBB7 561 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 PRAMEF14Q5SWL7 426 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 PRAMEF13Q5VWM6 474 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 GRHL2Q6ISB3 625 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 OGFOD2Q6N063 350 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 LCTLQ6UWM7 567 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 Q6ZSR9 355 aa18.82■□□□□ 0.6
SKP2-208ENST00000546211 LPCAT2Q7L5N7 544 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms