RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 C1orf189Q5VU69 101 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 MLIPQ5VWP3 458 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 RHBDD2Q6NTF9 364 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 HPS6Q86YV9 775 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 LRRN4CLQ8ND94 238 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 OR13J1Q8NGT2 312 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 SGSM3Q96HU1 749 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 KIFC1Q9BW19 673 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 CHRNA10Q9GZZ6 450 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 SPRTNQ9H040 489 aaPredicted RBP13.49□□□□□ -0.25
CCND1-204ENST00000539241 GPR83Q9NYM4 423 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 SAMD15Q9P1V8 674 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 DMGDHQ9UI17 866 aaKnown RBP13.49□□□□□ -0.25
CCND1-204ENST00000539241 PLAGL1Q9UM63 463 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 SOX13Q9UN79 622 aa13.49□□□□□ -0.25
CCND1-204ENST00000539241 MED13Q9UHV7 2174 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 ESYT3A0FGR9 886 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 ZSCAN9O15535 394 aaPredicted RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 HCRTR1O43613 425 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 KDM1AO60341 852 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 OR1I1O60431 355 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 KLF7O75840 302 aaPredicted RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 GOT2P00505 430 aaKnown RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 TPBGLP0DKB5 382 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 ARL4CP56559 192 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 GUCY2DQ02846 1103 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 ACVR1Q04771 509 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 RAPSNQ13702 412 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 LYPLAL1Q5VWZ2 237 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 JMJD6Q6NYC1 403 aaPredicted RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 CASC4Q6P4E1 433 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 AFTPHQ6ULP2 937 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 MRGPREQ86SM8 312 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 LURAP1LQ8IV03 231 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 MPP5Q8N3R9 675 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 ZNF655Q8N720 491 aaPredicted RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 RBMXL3Q8N7X1 1067 aaKnown RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 FLVCR1-AS1Q8TAF5 88 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 PROKR1Q8TCW9 393 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 HDAC10Q969S8 669 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 IP6K3Q96PC2 410 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 GBP5Q96PP8 586 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 TTC1Q99614 292 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 SMAD5Q99717 465 aaKnown RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 LRRC4CQ9HCJ2 640 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 SLAMF7Q9NQ25 335 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 TREX1Q9NSU2 369 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 IRAK4Q9NWZ3 460 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 LUZP4Q9P127 313 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 SLC2A6Q9UGQ3 507 aa13.48□□□□□ -0.25
CCND1-204ENST00000539241 GPN3Q9UHW5 284 aaPredicted RBP13.48□□□□□ -0.25
CCND1-204ENST00000539241 NBPF19A0A087WUL8 3843 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 FAM237BA0A1B0GVD1 139 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 ISM1B1AKI9 464 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 F8W8V4 182 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 AGFG2O95081 481 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 CTSBP07858 339 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 PEBP1P30086 187 aaKnown RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 PLTPP55058 493 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 DCDP81605 110 aaKnown RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 DHX9Q08211 1270 aaKnown RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 CBLBQ13191 982 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 SSPNQ14714 243 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 KIR2DS3Q14952 304 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 TRADDQ15628 312 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 INPP5JQ15735 1006 aaPredicted RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 KYNUQ16719 465 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 SLC5A12Q1EHB4 618 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 PRR30Q53SZ7 412 aaPredicted RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 SLC6A19Q695T7 634 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 TLDC1Q6P9B6 456 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 ZDHHC24Q6UX98 284 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 AGGF1Q8N302 714 aaeCLIP13.47□□□□□ -0.25
CCND1-204ENST00000539241 DNAJC22Q8N4W6 341 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 Q8NA96 180 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 FBXO25Q8TCJ0 367 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 PNPLA2Q96AD5 504 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 LRRC39Q96DD0 335 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 ZNF778Q96MU6 729 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 NAT9Q9BTE0 207 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 PHACTR1Q9C0D0 580 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 CHRAC1Q9NRG0 131 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 TXLNGQ9NUQ3 528 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 DHCR7Q9UBM7 475 aaKnown RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 NDOR1Q9UHB4 597 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 SRPK3Q9UPE1 567 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 PTRH2Q9Y3E5 179 aaKnown RBP13.47□□□□□ -0.25
CCND1-204ENST00000539241 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
CCND1-204ENST00000539241 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
CCND1-204ENST00000539241 E7ESA3 106 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms