RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 TNNT3P45378 269 aaPredicted RBP15.73■□□□□ 0.11
VIM-208ENST00000497849 CARSP49589 748 aaKnown RBP15.73■□□□□ 0.11
VIM-208ENST00000497849 TAF1AQ15573 450 aaPredicted RBP15.73■□□□□ 0.11
VIM-208ENST00000497849 Q6ZPB1 254 aaPredicted RBP15.73■□□□□ 0.11
VIM-208ENST00000497849 MICALCLQ6ZW33 695 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 NDUFAF7Q7L592 441 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 STT3BQ8TCJ2 826 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 ULK4Q96C45 1275 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 RNF32Q9H0A6 362 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 ENAMQ9NRM1 1142 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 ASF1AQ9Y294 204 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 TDRKHQ9Y2W6 561 aaKnown RBP15.73■□□□□ 0.11
VIM-208ENST00000497849 IGLV3-16A0A075B6K0 115 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 NSG1A0A0A6YYJ2 146 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 SOWAHDA6NJG2 315 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 CFAP99D6REC4 459 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 AKR1B10O60218 316 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 PRAMEF2O60811 474 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 BMP10O95393 424 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 AGTP01019 485 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 NSG1P42857 185 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 CDKN1CP49918 316 aaPredicted RBP15.72■□□□□ 0.11
VIM-208ENST00000497849 DYNLT1P63172 113 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 CACNG1Q06432 222 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 MPP3Q13368 585 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 GRM7Q14831 915 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 KIR2DS3Q14952 304 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 YOD1Q5VVQ6 348 aaPredicted RBP15.72■□□□□ 0.11
VIM-208ENST00000497849 HIBCHQ6NVY1 386 aaPredicted RBP15.72■□□□□ 0.11
VIM-208ENST00000497849 NLRP9Q7RTR0 991 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 VSIG1Q86XK7 387 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 SPPL2CQ8IUH8 684 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 PRSS58Q8IYP2 241 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 TBC1D21Q8IYX1 336 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 HEXDCQ8WVB3 486 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 CCDC42Q96M95 316 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 ZNF285Q96NJ3 590 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 MAK16Q9BXY0 300 aaKnown RBP15.72■□□□□ 0.11
VIM-208ENST00000497849 GPAMQ9HCL2 828 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 CTTNBP2NLQ9P2B4 639 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 SAE1Q9UBE0 346 aaPredicted RBP15.72■□□□□ 0.11
VIM-208ENST00000497849 C3orf18Q9UK00 162 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 NENFQ9UMX5 172 aa15.72■□□□□ 0.11
VIM-208ENST00000497849 A0A1W2PQ72 361 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 FAM221AA4D161 298 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 OR5H15A6NDH6 313 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 C2orf81A6NN90 581 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 FANCGO15287 622 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 FAM155BO75949 473 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 ZGLP1P0C6A0 271 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 GRIA3P42263 894 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 ALKBH5Q6P6C2 394 aaKnown RBP15.71■□□□□ 0.11
VIM-208ENST00000497849 ZNF449Q6P9G9 518 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 RAD9BQ6WBX8 426 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 SNX20Q7Z614 316 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 LAPTM4BQ86VI4 370 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 TMEM139Q8IV31 216 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 ZNF567Q8N184 647 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 CLDN19Q8N6F1 224 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 OR5K2Q8NHB8 316 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 THAP3Q8WTV1 239 aaPredicted RBP15.71■□□□□ 0.11
VIM-208ENST00000497849 MIEF2Q96C03 454 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 MAGED4Q96JG8 741 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 BAG1Q99933 345 aaPredicted RBP15.71■□□□□ 0.11
VIM-208ENST00000497849 PACSIN1Q9BY11 444 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 VPS37BQ9H9H4 285 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 ZDHHC3Q9NYG2 299 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 IL1RAPL1Q9NZN1 696 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 KLHL8Q9P2G9 620 aaPredicted RBP15.71■□□□□ 0.11
VIM-208ENST00000497849 TNFRSF10DQ9UBN6 386 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 POLG2Q9UHN1 485 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 PCDHGB6Q9Y5F9 930 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 HCFC1P51610 2035 aa15.71■□□□□ 0.11
VIM-208ENST00000497849 INTS1Q8N201 2190 aaKnown RBP15.7■□□□□ 0.1
VIM-208ENST00000497849 ABCA4P78363 2273 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 FITM1A5D6W6 292 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 CCL22O00626 93 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 ZFXP17010 805 aaPredicted RBP15.7■□□□□ 0.1
VIM-208ENST00000497849 ITGALP20701 1170 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 MSLNQ13421 630 aaPredicted RBP15.7■□□□□ 0.1
VIM-208ENST00000497849 SLC18A3Q16572 532 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 LONRF1Q17RB8 773 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 TFDP3Q5H9I0 405 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 TCTE1Q5JU00 501 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 CNSTQ6PJW8 725 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 RFX6Q8HWS3 928 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 LMNTD1Q8N9Z9 388 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 LINC01555Q8NAE3 123 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 TFB1MQ8WVM0 346 aaKnown RBP15.7■□□□□ 0.1
VIM-208ENST00000497849 GPR137Q96N19 417 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 GORASP1Q9BQQ3 440 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 FSD1LQ9BXM9 530 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 ZNF304Q9HCX3 659 aa15.7■□□□□ 0.1
VIM-208ENST00000497849 ZNF282Q9UDV7 671 aaPredicted RBP15.7■□□□□ 0.1
VIM-208ENST00000497849 IGHV1-45A0A0A0MS14 117 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 TRBV5-4A0A0C4DH59 114 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 C5orf60A6NFR6 353 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms