RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 AGAP7PQ5VUJ5 663 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CPZQ66K79 652 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ACSM2BQ68CK6 577 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 GTF2IRD2BQ6EKJ0 949 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 NADSYN1Q6IA69 706 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CES5AQ6NT32 575 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZCCHC8Q6NZY4 707 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 NEK5Q6P3R8 708 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 FUT10Q6P4F1 479 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 DOK6Q6PKX4 331 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 SBSNQ6UWP8 590 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 MACC1Q6ZN28 852 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PLEKHG7Q6ZR37 379 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRR23CQ6ZRP0 262 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC16A12Q6ZSM3 486 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 FAM92BQ6ZTR7 304 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 USP45Q70EL2 814 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 UBE2R2Q712K3 238 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 EIF3MQ7L2H7 374 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 C16orf59Q7L2K0 433 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CHST15Q7LFX5 561 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CYP2U1Q7Z449 544 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 B3GNT8Q7Z7M8 397 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF605Q86T29 641 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 RNF180Q86T96 592 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 AKAP14Q86UN6 197 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 GTF2IRD2Q86UP8 949 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 TSPYL5Q86VY4 417 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CALHM3Q86XJ0 350 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 KRT73Q86Y46 540 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 DCP2Q8IU60 420 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 SYT12Q8IV01 421 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 LACC1Q8IV20 430 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 DENND1CQ8IV53 801 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PIANPQ8IYJ0 282 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 RGL4Q8IZJ4 473 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CFAP52Q8N1V2 620 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PGBD3Q8N328 593 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CBARPQ8N350 705 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 STX19Q8N4C7 294 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 BEND7Q8N7W2 519 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 DCBLD1Q8N8Z6 715 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 TTC29Q8NA56 475 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 DCAF4L2Q8NA75 395 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 FBXO22Q8NEZ5 403 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR6Q1Q8NGQ2 317 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 MCFD2Q8NI22 146 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 C9orf43Q8TAL5 461 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CNIH3Q8TBE1 160 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 GPR152Q8TDT2 470 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 FBLIM1Q8WUP2 373 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 SKA2Q8WVK7 121 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ATL1Q8WXF7 558 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 USP7Q93009 1102 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC38A4Q969I6 547 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ESAMQ96AP7 390 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 TESCQ96BS2 214 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 RHBDF1Q96CC6 855 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 REPS1Q96D71 796 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ASIC4Q96FT7 647 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CRELD1Q96HD1 420 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 METTL2AQ96IZ6 378 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CEP19Q96LK0 163 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ALPK1Q96QP1 1244 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 COPS8Q99627 209 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 EPYCQ99645 322 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PSD2Q9BQI7 771 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 TTPALQ9BTX7 342 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ITPAQ9BY32 194 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 AMBRA1Q9C0C7 1298 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 RACGAP1Q9H0H5 632 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 MMP27Q9H306 513 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC32A1Q9H598 525 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 NSUN3Q9H649 340 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ELAC1Q9H777 363 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF556Q9HAH1 456 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZFYVE1Q9HBF4 777 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 MOV10Q9HCE1 1003 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CPNE5Q9HCH3 593 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 AKIP1Q9NQ31 210 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 FBXO8Q9NRD0 319 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 RAD18Q9NS91 495 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 DNAJC11Q9NVH1 559 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PAK1IP1Q9NWT1 392 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ARL15Q9NXU5 204 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZDHHC3Q9NYG2 299 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CCDC59Q9P031 241 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PDP1Q9P0J1 537 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 IL17CQ9P0M4 197 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLAMF8Q9P0V8 285 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 CRNNQ9UBG3 495 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 AFF4Q9UHB7 1163 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 RAPGEFL1Q9UHV5 662 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 TSR3Q9UJK0 312 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF225Q9UK10 706 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 IKZF3Q9UKT9 509 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 INTS6Q9UL03 887 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 VPS4AQ9UN37 437 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 DOLKQ9UPQ8 538 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 USP22Q9UPT9 525 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms